CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At1g21250

Gene name WAK1 (CELL WALL-ASSOCIATED KINASE)

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
0.21 15.8 At1g21250 838721 WAK1 (CELL WALL-ASSOCIATED KINASE) cell wall-associated kinase, may function as a signaling receptor of extracellular matrix component. S.X. H.G.
0.73 85.5 At5g10380 830902 RING1 Encodes a RING finger domain protein with E3 ligase activity that is localized to the lipid rafts of the plasma membrane. Expression is increased in response to fungal pathogen. May be involved in regulation of programmed cell death by facilitating degredation of regulation of PDC activators. S.X. H.G.
0.67 81.6 At3g57260 824893 BGL2 (BETA-1,3-GLUCANASE 2) beta 1,3-glucanase S.X. H.G.
0.67 81.6 At5g10760 830943 aspartyl protease family protein F:aspartic-type endopeptidase activity;P:proteolysis;C:apoplast;PMFO S.X. H.G.
0.57 73.8 At2g32680 817828 AtRLP23 (Receptor Like Protein 23) F:protein binding, kinase activity;P:signal transduction, defense response;C:endomembrane system;PMOBFAV S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
30.7 99.7 GSM133064 2528 GSE5685 AtGenExpress: Pathogen Series: Pseudomonas half leaf injection
27.8 99.7 GSM133037 2508 GSE5685 AtGenExpress: Pathogen Series: Pseudomonas half leaf injection
26.0 99.7 GSM133063 2526 GSE5685 AtGenExpress: Pathogen Series: Pseudomonas half leaf injection
25.4 99.6 GSM322556 genotype: ataf1-1 mutant, ecotype Col-0 - treated or untreated: Bgh inoculated - rep3 GSE12856 Penetration resistance: Wildtype and ataf1-1 mutant response to Bgh 12 h after inoculation, 22 factorial design
23.8 99.6 GSM133058 2506 GSE5685 AtGenExpress: Pathogen Series: Pseudomonas half leaf injection
23.5 99.6 GSM133041 2525 GSE5685 AtGenExpress: Pathogen Series: Pseudomonas half leaf injection
22.3 99.6 GSM322555 genotype: ataf1-1 mutant, ecotype Col-0 - treated or untreated: Bgh inoculated - rep2 GSE12856 Penetration resistance: Wildtype and ataf1-1 mutant response to Bgh 12 h after inoculation, 22 factorial design
21.7 99.6 GSM133050 2791 GSE5685 AtGenExpress: Pathogen Series: Pseudomonas half leaf injection
21.5 99.6 GSM322550 genotype: Wild-type Arabidopsis, ecotype Col-0 - treated or untreated: Bgh inoculated - rep3 GSE12856 Penetration resistance: Wildtype and ataf1-1 mutant response to Bgh 12 h after inoculation, 2*2 factorial design
20.5 99.6 GSM133046 2788 GSE5685 AtGenExpress: Pathogen Series: Pseudomonas half leaf injection
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.73 0 1419 At1g21240 838719 WAK3 (wall associated kinase 3) encodes a wall-associated kinase C.G. S.X.
0.57 0 1382 At1g21210 838716 WAK4 (wall associated kinase 4) cell wall-associated ser/thr kinase involved in cell elongation and lateral root development C.G. S.X.
0.66 0 1287 At1g21270 838723 WAK2 cytoplasmic serine/threonine protein kinase induced by salicylic acid. mutant plants exhibit a loss of cell expansion and dependence on sugars and salts for seedling growth, affecting the expression and activity of vacuolar invertase. C.G. S.X.
0.78 0 1118 At1g21230 838718 WAK5 (WALL ASSOCIATED KINASE 5) encodes a wall-associated kinase C.G. S.X.
0.57 0 981 At3g25490 822134 wall-associated kinase, putative F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA C.G. S.X.
0.33 2e-134 480 At1g21245 838720 wall-associated kinase-related F:protein kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cellular_component unknown;PMBO C.G. S.X.
0.22 2e-76 287 At1g22720 838878 wall-associated kinase, putative F:protein tyrosine kinase activity, protein kinase activity, kinase activity, calcium ion binding, ATP binding;P:protein amino acid phosphorylation;C:cellular_component unknown;PMOFVB C.G. S.X.
0.05 2e-11 71 At1g16110 838180 WAKL6 (wall associated kinase-like 6) WAK-like kinase C.G. S.X.
0.01 5e-6 54 At5g15080 831360 protein kinase, putative F:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation, N-terminal protein myristoylation;C:plasma membrane;MPOBFVA C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.06 7e-6 54 Glycine max GmaAffx.1889.1.S1_at BU578146 - - 2e-11 At1g21270 WAK2 C.G. S.X.
0.05 9e-3 42 Hordeum vulgare Contig14031_at Contig14031 - - 5e-4 At1g07560 leucine-rich repeat protein kinase, putative C.G. S.X.
0.04 1e-7 59 Oryza sativa Os11g0565300 9639.m03230 - Protein kinase family protein 6e-8 At1g21210 WAK4 (wall associated kinase 4) C.G. S.X.
0.08 7e-9 63 Populus trichocarpa PtpAffx.225890.1.S1_at pmrna45536 hypothetical protein - 1e-12 At1g79670 RFO1 (RESISTANCE TO FUSARIUM OXYSPORUM 1) C.G. S.X.
0.05 7e-2 40 Triticum aestivum TaAffx.85861.1.S1_at CA618948 - - 2e-5 At4g31100 wall-associated kinase, putative C.G. S.X.
0.02 3e-1 36 Vitis vinifera 1610364_at BM437363 hypothetical protein LOC100256105 - 4e-10 At5g15080 protein kinase, putative C.G. S.X.
0.02 2e-9 63 Zea mays Zm.2906.1.S1_at AY110115.1 somatic embryogenesis receptor-like kinase2 - 2e-51 At1g34210 SERK2 (SOMATIC EMBRYOGENESIS RECEPTOR-LIKE KINASE 2) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
X GO:0009751 A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a salicylic acid stimulus.
X GO:0007166 Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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