Gene omics information

Query gene ID At1g20630
Gene name CAT1 (CATALASE 1)
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At1g20630838652CAT1 (CATALASE 1)Catalyzes the reduction of hydrogen peroxide using heme group as cofactor. Protects cells from toxicity by H2O2.S.X.H.G.
0.6478.9At1g54290841870eukaryotic translation initiation factor SUI1, putativeF:translation initiation factor activity;P:translational initiation, translation;C:cellular_component unknown;MPFOAVBS.X.H.G.
0.6176.7At5g58950836012protein kinase family proteinF:protein serine/threonine/tyrosine kinase activity, kinase activity;P:protein amino acid phosphorylation;C:cytosol, plasma membrane;MPOFBVAS.X.H.G.
0.5974.7At3g47080823861bindingF:binding;P:unknown;C:unknown;PBOAMS.X.H.G.
0.5570.6At4g20890827837TUB9tubulin 9S.X.H.G.
0.5368.6At1g04985839352unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.5368.6At2g34770818042FAH1 (FATTY ACID HYDROXYLASE 1)encodes a fatty acid hydroxylase, required for the AtBI-1-mediated suppression of programmed cell death.S.X.H.G.
0.4862.5At1g22200838825unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endoplasmic reticulum;MOFPS.X.H.G.
0.4862.5At3g03090821117AtVGT1 (Arabidopsis thaliana vacuolar glucose transporter 1)Encodes a vacuolar membrane-localized glucose transporter that can also transport fructose. Mutations in these gene have effects on seed germination and time to flowering.S.X.H.G.
0.4761.2At3g14595820686unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PBOS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
53.199.8GSM205185protoplast_KIN10_rep2GSE8257Identification of KIN10-target genes in Arabidopsis mesophyll cells
35.299.7E-MEXP-285-raw-cel-440782725
35.299.7E-MEXP-1138-raw-cel-1432773226
34.599.7E-MEXP-285-raw-cel-440782791
34.399.7E-MEXP-1138-raw-cel-1432772522
34.299.7GSM131608ATGE_42_DGSE5632AtGenExpress: Developmental series (flowers and pollen)
33.699.7GSM142740DH001_ATH1_A7-MPG1GSE6162Transcriptome analysis of Arabidopsis microgametogenesis
33.199.7GSM239252Columbia glabrous (C24) wild type stamenGSE9408Identification of putative Arabidopsis DEMETER target genes by GeneChip Analysis
33.099.7E-MEXP-1138-raw-cel-1432773386
32.699.7E-MEXP-1138-raw-cel-1432773162
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.693e-123442At4g35090829661CAT2 (CATALASE 2)Encodes a peroxisomal catalase, highly expressed in bolts and leaves. mRNA expression patterns show circadian regulation with mRNA levels being high in the subjective early morning. Loss of function mutations have increased H2O2 levels and increased H2O2 sensitivity. Mutants accumulate more toxic ions yet show decreased sensitivity to Li+. This decreased sensitivity is most likely due to an insensitivity to ethylene. Note that in Queval et al. (2007) Plant Journal, 52(4):640, SALK_057998 is named as cat2-1, SALK_076998 is named as cat2-2; in Bueso et al. (2007) Plant Journal, 52(6):1052, SALK_076998 is named as cat2-1. TAIR has adopted the nomenclature consistent with that in Bueso et al. (2007) after consultation with the authors: SALK_076998 (cat2-1), SALK_057998 (cat2-2).C.G.S.X.
0.545e-51202At1g20620838651CAT3 (CATALASE 3)Catalase, catalyzes the breakdown of hydrogen peroxide (H2O2) into water and oxygen.C.G.S.X.
0.027e-136At2g206055007890-Encodes a Plant thionin family proteinC.G.S.X.
0.017e-136At1g17760838354CSTF77Encodes a homolog of the mammalian protein CstF77, a polyadenylation factor subunit.C.G.S.X.
0.017e-136At1g45100841077polyadenylate-binding protein, putative / PABP, putativeF:RNA binding, nucleotide binding, nucleic acid binding;P:unknown;C:unknown;MFPOBC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.583e-130466Glycine maxGma.2444.1.S1_a_atAF035255.1catalase /// catalase-2e-113At4g35090CAT2 (CATALASE 2)C.G.S.X.
0.181e-1377Hordeum vulgareContig1846_s_atContig1846--9e-29At4g35090CAT2 (CATALASE 2)C.G.S.X.
0.456e-83309Oryza sativaOs06g0727200D26484.1--5e-83At1g20630CAT1 (CATALASE 1)C.G.S.X.
0.660741Populus trichocarpaPtpAffx.201549.1.S1_atpmrna3044catalase-0At4g35090CAT2 (CATALASE 2)C.G.S.X.
0.392e-50200Triticum aestivumTa.28032.1.S1_atX94352.1catalase-3e-90At4g35090CAT2 (CATALASE 2)C.G.S.X.
0.640692Vitis vinifera1610871_s_atCD716100hypothetical protein LOC100244516-0At4g35090CAT2 (CATALASE 2)C.G.S.X.
0.514e-56218Zea maysZm.6357.1.S1_atAY103601.1catalase1-8e-85At4g35090CAT2 (CATALASE 2)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
XGO:0046686A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cadmium (Cd) ion stimulus.
XGO:0042542A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a hydrogen peroxide (H2O2) stimulus.
XGO:0006995A change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of deprivation of nitrogen.
XGO:0009416A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a light stimulus, electromagnetic radiation of wavelengths classified as infrared, visible or ultraviolet light.
XGO:0009970A change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of deprivation of sulfate.
XGO:0016036A change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of deprivation of phosphate.
XGO:0009737A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an abscisic acid stimulus.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
00380Link to KEGG PATHWAYTryptophan metabolism
00680Link to KEGG PATHWAYMethane metabolism
01100Link to KEGG PATHWAYMetabolic pathways
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