Gene omics information

Query gene ID At1g19835
Gene name unknown protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At1g19835838571unknown proteinF:molecular_function unknown;P:biological_process unknown;C:plasma membrane;MOBFPAVS.X.H.G.
0.2522.6At1g65010842809unknown proteinF:unknown;P:unknown;C:chloroplast;MOBFPAVS.X.H.G.
0.2522.6At3g23690821950basic helix-loop-helix (bHLH) family proteinF:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleus;PFMOBS.X.H.G.
0.2319.3At2g01910814722ATMAP65-6Binds microtubules. Induces a crisscross mesh of microtubules, not bundles. Not involved in microtubule polymerization nor nucleation. Localizes to mitochondria.S.X.H.G.
0.2319.3At3g06410819815nucleic acid binding / zinc ion bindingF:zinc ion binding, nucleic acid binding;P:biological_process unknown;C:unknown;OMPFBVS.X.H.G.
0.2319.3At4g36890829842IRX14 (irregular xylem 14)The IRX14 gene encodes a putative family 43 glycosyl transferase that contributes to xylan biosynthesis. It was identified based on its gene expression co-variance with the IRX3 gene involved in secondary cell wall synthesis. A biochemical assay using the irx14 mutant indicates that IRX14 might function in xylose chain elongation.S.X.H.G.
0.2319.3At3g23750821957leucine-rich repeat family protein / protein kinase family proteinF:protein binding, protein serine/threonine kinase activity, protein kinase activity, ATP binding;P:protein amino acid phosphorylation;C:plasma membrane;MPOBFVAS.X.H.G.
0.2319.3At3g60860825257guanine nucleotide exchange family proteinF:binding, ARF guanyl-nucleotide exchange factor activity, guanyl-nucleotide exchange factor activity;P:regulation of ARF protein signal transduction;C:intracellular;MFOPBS.X.H.G.
0.2217.5At4g10840826680kinesin light chain-relatedF:binding;P:unknown;C:plasma membrane;MBOFAPVS.X.H.G.
0.2217.5At5g08130830708BIM1Arabidopsis thaliana basic helix-loop-helix (bHLH) family protein involved in brassinosteroid signaling. It synergistically interacts with BES1 to bind to E box sequences (CANNTG).S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
55.699.8GSM226548Slice6JWGSE8934A high resolution organ expression map reveals novel expression patterns and predicts cellular function
54.399.8GSM184904Arabidopsis, root cells, protophloem, standard conditions, replicate 1GSE7641Expression analysis of root cell-types after treatment with salt
38.499.8GSM226538L8SBGSE8934A high resolution organ expression map reveals novel expression patterns and predicts cellular function
36.899.7GSM226542L12SBGSE8934A high resolution organ expression map reveals novel expression patterns and predicts cellular function
33.999.7GSM184905Arabidopsis, root cells, protophloem, standard conditions, replicate 2GSE7641Expression analysis of root cell-types after treatment with salt
30.399.7GSM184483Lateral Root Cap root cells 2hr continuous KNO3 treated, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis root
28.699.7GSM226536L6SBGSE8934A high resolution organ expression map reveals novel expression patterns and predicts cellular function
27.699.7GSM184477Lateral Root Cap root cells 2hr KCl control treated, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis root
18.899.5GSM184924Arabidopsis, root cells, protophloem, 140 mM NaCl, replicate 3GSE7641Expression analysis of root cell-types after treatment with salt
18.599.5GSM184922Arabidopsis, root cells, protophloem, 140 mM NaCl, replicate 1GSE7641Expression analysis of root cell-types after treatment with salt
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.141e-1069At1g47900841207unknown proteinF:molecular_function unknown;P:biological_process unknown;C:plasma membrane;MOBFPAVC.G.S.X.
0.062e-656At4g36120829769unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOBFPAVC.G.S.X.
0.032e-346At3g05270819691-F:unknown;P:unknown;C:unknown;MOBFPAVC.G.S.X.
0.042e-346At1g77580844093myosin heavy chain-relatedF:unknown;P:unknown;C:unknown;MOBFPAVC.G.S.X.
0.019e-240At2g18880816404VEL2 ((VERNALIZATION5/VIN3-LIKE))F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.015e-138Glycine maxHgAffx.3688.1.S1_atCK349002--2e+0At2g40110yippee family proteinC.G.S.X.
0.017e-136Hordeum vulgareContig16547_atContig16547--1e+0At1g35170-C.G.S.X.
0.041e-863Oryza sativaOs03g0246500AK066916.1-Plant protein of unknown function DUF869 familyprotein6e-10At1g47900unknown proteinC.G.S.X.
0.165e-32141Populus trichocarpaPtpAffx.205817.1.S1_atpmrna11506hypothetical protein-9e-21At1g47900unknown proteinC.G.S.X.
0.026e-344Triticum aestivumTa.7290.1.S1_x_atCA722757--7e-1At3g23610dual specificity protein phosphatase (DsPTP1)C.G.S.X.
0.011e-138Vitis vinifera1619513_atCA817243hypothetical protein LOC100247939-4e-7At2g33600cinnamoyl-CoA reductase familyC.G.S.X.
0.012e-138Zea maysZmAffx.498.1.A1_atAI691679--3e+0At4g30730unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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