Gene omics information

Query gene ID At1g18890
Gene name ATCDPK1 (CALCIUM-DEPENDENT PROTEIN KINASE 1)
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.3338.1At1g18890838470ATCDPK1 (CALCIUM-DEPENDENT PROTEIN KINASE 1)encodes a calcium-dependent protein kinase whose gene expression is induced by dehydration and high salt. Kinase activity could not be detected in vitro.S.X.H.G.
0.5368.6At5g61210836242SNAP33 (SOLUBLE N-ETHYLMALEIMIDE-SENSITIVE FACTOR ADAPTOR PROTEIN 33)membrane localized t-SNARE SNAP25 homologue, probably involved in cytokinesis and cell plate formationS.X.H.G.
0.5065.3At1g08930837414ERD6 (EARLY RESPONSE TO DEHYDRATION 6)encodes a putative sucrose transporter whose gene expression is induced by dehydration and cold.S.X.H.G.
0.5065.3At3g11820820355SYP121 (SYNTAXIN OF PLANTS 121)Encodes a syntaxin localized at the plasma membrane (SYR1, Syntaxin Related Protein 1, also known as SYP121, PENETRATION1/PEN1). SYR1/PEN1 is a member of the SNARE superfamily proteins. SNARE proteins are involved in cell signaling, vesicle traffic, growth and development. SYR1/PEN1 functions in positioning anchoring of the KAT1 K+ channel protein at the plasma membrane. Transcription is upregulated by abscisic acid, suggesting a role in ABA signaling. Also functions in non-host resistance against barley powdery mildew, Blumeria graminis sp. hordei. SYR1/PEN1 is a nonessential component of the preinvasive resistance against Colletotrichum fungus. Required for mlo resistance.S.X.H.G.
0.4659.8At2g37940818371-F:molecular_function unknown;P:biological_process unknown;C:unknown;MOPS.X.H.G.
0.4457.2At2g40270818619protein kinase family proteinF:protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:plasma membrane;PMOBFVAS.X.H.G.
0.4355.3At5g02290831880NAKEncodes a candidate protein kinase NAK that is similar to the oncogenes met and abl.S.X.H.G.
0.4152.4At4g25030828606unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PBFS.X.H.G.
0.4050.8At1g59870842281PEN3 (PENETRATION 3)ATP binding cassette transporter. Localized to the plasma membrane in uninfected cells. In infected leaves, the protein concentrated at infection sites. Contributes to nonhost resistance to inappropriate pathogens that enter by direct penetration in a salicylic acid–dependent manner. Required for mlo resistance. Has Cd transporter activity (Cd2+ extrusion pump) and contributes to heavy metal resistance.S.X.H.G.
0.3948.4At4g35600829712CONNEXIN 32plant-type connexin (gap junction-type protein), a component of plasmodesmataS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
40.599.8E-MEXP-807-raw-cel-1173273252
39.499.8E-MEXP-807-raw-cel-1173272948
34.499.7E-MEXP-807-raw-cel-1173273170
23.899.6GSM142852MG001_ATH1_A5-Torres-2N3GSE6176Impact of Type III effectors on plant defense responses
21.999.6GSM142829GM001_ATH1_A11-Torres-5N3GSE6176Impact of Type III effectors on plant defense responses
20.299.6E-MEXP-546-raw-cel-863289532
19.999.6GSM142839MG001_ATH1_A18-Torres-6N6GSE6176Impact of Type III effectors on plant defense responses
19.799.6GSM128661Underwood_1-14_Cor-5x10e7-10h_Rep2_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
17.599.5GSM128662Underwood_1-15_Cor-5x10e7-10h_Rep3_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
16.999.5GSM13780CycloheximideGSE911Identification of LEAFY targets during reproductive transition
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.7801392At1g74740843813CPK30 (CALCIUM-DEPENDENT PROTEIN KINASE 30)member of Calcium Dependent Protein KinaseC.G.S.X.
0.365e-30133At3g51850824348CPK13member of Calcium Dependent Protein KinaseC.G.S.X.
0.163e-22107At2g41860818786CPK14member of Calcium Dependent Protein KinaseC.G.S.X.
0.177e-2099At5g19450832065CDPK19 (CALCIUM-DEPENDENT PROTEIN KINASE 19)calcium-dependent protein kinase (CDPK19) mRNA, completeC.G.S.X.
0.243e-1997At5g12480831123CPK7 (calmodulin-domain protein kinase 7)calmodulin-domain protein kinase CDPK isoform 7 (CPK7)C.G.S.X.
0.241e-1481At3g57530824920CPK32 (CALCIUM-DEPENDENT PROTEIN KINASE 32)Calcium-dependent Protein Kinase. ABA signaling component that regulates the ABA-responsive gene expression via ABF4. AtCPK32 has autophosphorylation activity and can phosphorylate ABF4 in vitroC.G.S.X.
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Orthologous genes



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HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.201e-1895Glycine maxGmaAffx.86567.2.S1_atBG881805--3e-22At1g74740CPK30 (CALCIUM-DEPENDENT PROTEIN KINASE 30)C.G.S.X.
0.145e-22105Hordeum vulgareContig7135_atContig7135--4e-31At2g41860CPK14C.G.S.X.
0.165e-1067Oryza sativaOs07g0568600AK068315.1-Calcium-dependent protein kinase4e-25At2g41860CPK14C.G.S.X.
0.577e-144511Populus trichocarpaPtpAffx.210526.1.S1_s_atpmrna20640calcium dependent protein kinase 10 /// calcium dependent protein kinase 28-2e-149At1g74740CPK30 (CALCIUM-DEPENDENT PROTEIN KINASE 30)C.G.S.X.
0.136e-1479Triticum aestivumTa.4580.2.S1_a_atBJ268280calcium-dependent protein kinase-8e-14At5g12480CPK7 (calmodulin-domain protein kinase 7)C.G.S.X.
0.263e-1995Vitis vinifera1618615_s_atCF211026--6e-104At3g51850CPK13C.G.S.X.
0.074e-1065Zea maysZm.15283.1.A1_atCO532462calcium-dependent protein kinase, isoform AK1-2e-16At3g57530CPK32 (CALCIUM-DEPENDENT PROTEIN KINASE 32)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
SGO:0009738A series of molecular signals mediated by the detection of abscisic acid.
CGO:0006468The process of introducing a phosphate group on to a protein.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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