CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At1g18880

Gene name proton-dependent oligopeptide transport (POT) family protein

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
0.42 53.9 At1g18880 838469 proton-dependent oligopeptide transport (POT) family protein F:transporter activity;P:oligopeptide transport;C:membrane;PMBFO S.X. H.G.
0.75 86.9 At4g30450 829168 glycine-rich protein F:molecular_function unknown;P:biological_process unknown;C:unknown;MOBPFVA S.X. H.G.
0.73 85.5 At3g53980 824565 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein F:lipid binding;P:lipid transport;C:endomembrane system;P S.X. H.G.
0.53 68.6 At4g30460 829169 glycine-rich protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;MBOPFVA S.X. H.G.
0.44 57.2 At2g04800 815024 unknown protein F:molecular_function unknown;P:N-terminal protein myristoylation;C:cellular_component unknown;P S.X. H.G.
0.44 57.2 At5g43180 834336 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PBO S.X. H.G.
0.40 50.8 At5g05960 830481 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein F:lipid binding;P:lipid transport;C:endomembrane system;P S.X. H.G.
0.33 38.1 At3g23430 821924 PHO1 (phosphate 1) mutant is deficient in the transfer of phosphate from root epidermal and cortical cells to the xylem. encodes protein with the mainly hydrophilic N-terminal and the C-terminal containing 6 potential membrane-spanning domains. S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
84.2 99.9 GSM142624 MC002_ATH1_A1.2-dubos-wtx GSE6151 The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
76.5 99.9 GSM142636 MC002_ATH1_A5.2-dubos-5kx GSE6151 The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
74.8 99.9 GSM142625 MC002_ATH1_A1.3-dubos-wtx GSE6151 The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
71.6 99.9 GSM142637 MC002_ATH1_A5.3-dubos-5kx GSE6151 The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
71.6 99.9 GSM142623 MC002_ATH1_A1.1-dubos-wtx GSE6151 The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
70.0 99.9 GSM142631 MC002_ATH1_A3.3-dubos-6kx GSE6151 The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
69.3 99.9 GSM142629 MC002_ATH1_A3.1-dubos-6kx GSE6151 The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
68.2 99.9 GSM142635 MC002_ATH1_A5.1-dubos-5kx GSE6151 The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
66.3 99.8 GSM142644 MC002_ATH1_A8.1-dubos-aih GSE6151 The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
62.2 99.8 GSM142630 MC002_ATH1_A3.2-dubos-6kx GSE6151 The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.10 1e-12 75 At5g62680 836389 proton-dependent oligopeptide transport (POT) family protein F:transporter activity;P:oligopeptide transport;C:plasma membrane, membrane;PMBFO C.G. S.X.
0.09 6e-11 69 At3g47960 823951 proton-dependent oligopeptide transport (POT) family protein F:transporter activity;P:oligopeptide transport;C:plasma membrane, membrane;PMBFO C.G. S.X.
0.01 1e-2 42 At3g25260 822120 proton-dependent oligopeptide transport (POT) family protein F:transporter activity;P:oligopeptide transport;C:membrane;BPMOF C.G. S.X.
0.01 6e-2 40 At1g68570 843186 proton-dependent oligopeptide transport (POT) family protein F:transporter activity;P:oligopeptide transport;C:membrane;BPMOF C.G. S.X.
0.01 2e-1 38 At3g45660 823708 proton-dependent oligopeptide transport (POT) family protein F:transporter activity;P:oligopeptide transport;C:membrane;PBMOF C.G. S.X.
0.01 2e-1 38 At2g30340 817584 LBD13 (LOB DOMAIN-CONTAINING PROTEIN 13) F:molecular_function unknown;P:biological_process unknown;C:membrane;PMOFVBA C.G. S.X.
0.01 9e-1 36 At5g60380 836160 unknown protein F:unknown;P:biological_process unknown;C:endomembrane system;PFB C.G. S.X.
0.01 9e-1 36 At4g34200 829568 EDA9 (embryo sac development arrest 9) F:ATP binding;P:megagametogenesis;C:mitochondrion, chloroplast, membrane;BOFMPAV C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.13 9e-11 69 Glycine max Gma.8475.1.S1_a_at AB052785.1 nitrate transporter NRT1-1 /// nitrate transporter NRT1-2 - 8e-11 At1g18880 proton-dependent oligopeptide transport (POT) family protein C.G. S.X.
0.01 2e+0 34 Hordeum vulgare Contig7388_at Contig7388 - - 6e-5 At3g47960 proton-dependent oligopeptide transport (POT) family protein C.G. S.X.
0.04 2e-3 46 Oryza sativa Os01g0913300 AK100698.1 - TGF-beta receptor, type I/II extracellular regionfamily protein 1e-3 At1g18880 proton-dependent oligopeptide transport (POT) family protein C.G. S.X.
0.07 3e-1 38 Populus trichocarpa PtpAffx.210523.1.S1_at pmrna20635 hypothetical protein - 2e-7 At5g62680 proton-dependent oligopeptide transport (POT) family protein C.G. S.X.
0.03 6e-2 40 Triticum aestivum Ta.5485.2.S1_at BJ279017 - - 2e+1 At5g47700 60S acidic ribosomal protein P1 (RPP1C) C.G. S.X.
0.07 2e-5 50 Vitis vinifera 1615359_at CA817149 hypothetical protein LOC100263850 - 5e-5 At1g18880 proton-dependent oligopeptide transport (POT) family protein C.G. S.X.
0.01 2e-2 40 Zea mays Zm.12244.1.A1_at AY105130.1 - - 4e-8 At2g37500 arginine biosynthesis protein ArgJ family C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
C GO:0006857 The directed movement of oligopeptides into, out of, within or between cells. Oligopeptides are molecules that contain a small number (2 to 20) of amino-acid residues connected by peptide linkages.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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