Gene omics information

Query gene ID At1g18380
Gene name -
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At1g18380---S.X.H.G.
0.6781.6At1g18390838420ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinaseF:protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:plasma membrane;MPOBFVAS.X.H.G.
0.6781.6At4g11850826791PLDGAMMA1phospholipase D (gamma)S.X.H.G.
0.4050.8At1g03740839423ATP binding / kinase/ protein kinase/ protein serine/threonine kinaseF:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation, N-terminal protein myristoylation;C:unknown;MPOFBVAS.X.H.G.
0.092.8At1g29690839846CAD1 (constitutively activated cell death 1)Encodes a protein containing a domain with significant homology to the MACPF (membrane attack complex and perforin) domain of complements and perforin proteins that are involved in innate immunity in animals. Transgenic cad1-1 mutant plants show lesions seen in the hypersensitive response, as well as a spontaneous activation of expression of pathogenesis-related genes and leading to a 32-fold increase in salicylic acid (SA). CAD1 is postulated to act as a negative regulator controlling SA-mediated pathway of programmed cell death in plant immunity.S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
113.799.9GSM13780CycloheximideGSE911Identification of LEAFY targets during reproductive transition
85.899.9GSM13779Dexamethasone plus cycloheximideGSE911Identification of LEAFY targets during reproductive transition
74.399.9E-MEXP-807-raw-cel-1173272948
55.999.8GSM13784Cycloheximide - replicateGSE911Identification of LEAFY targets during reproductive transition
52.399.8GSM253645High_Mo_seg_pool_Ler_col_F2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
52.399.8GSM184551Whole roots 2hr KCl control treated then incubated in protoplast-generating solution minus enzymes, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis root
44.299.8GSM131111AtGen_B-39_3-4-4_REP3_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitors
40.299.8GSM13783Dexamethasone plus cycloheximide - replicateGSE911Identification of LEAFY targets during reproductive transition
38.899.8GSM131139AtGen_B-25_2-4-4_REP2_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitors
38.399.8GSM253652Ler 2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.014e-136At5g44700834499GSO2 (GASSHO 2)Encodes GASSHO2 (GSO2), a putative leucine-rich repeat transmembrane-type receptor kinase. GSO2 and a homolog GSO1 (At4g20140) are required for the formation of a normal epidermal surface during embryogenesis.C.G.S.X.
0.024e-136At5g14730831325unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PBC.G.S.X.
0.034e-136At4g39410830096WRKY13member of WRKY Transcription Factor; Group II-cC.G.S.X.
0.022e+034At5g10880830955tRNA synthetase-related / tRNA ligase-relatedF:proline-tRNA ligase activity, aminoacyl-tRNA ligase activity, nucleotide binding, ATP binding;P:prolyl-tRNA aminoacylation, translation;C:cytoplasm;BOMFAPC.G.S.X.
0.012e+034At5g37010833671unknown proteinF:molecular_function unknown;P:N-terminal protein myristoylation;C:unknown;MOFBPVAC.G.S.X.
0.012e+034At5g04780830356-F:unknown;P:biological_process unknown;C:chloroplast;POMFBC.G.S.X.
0.022e+034At5g10240830888ASN3 (ASPARAGINE SYNTHETASE 3)Encodes asparagine synthetase (ASN3).C.G.S.X.
0.012e+034At2g43800818984formin homology 2 domain-containing protein / FH2 domain-containing proteinF:actin binding;P:cellular component organization, actin cytoskeleton organization;C:plasma membrane;MPFOBVAC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.025e-136Glycine maxPsAffx.C158000038_atPsAffx.C158000038--3e-2At5g56520unknown proteinC.G.S.X.
0.047e-134Hordeum vulgareContig19421_atContig19421--3e-1At1g18380-C.G.S.X.
0.023e+034Oryza sativaOs09g0108400AK106506.1-Conserved hypothetical protein3e-1At1g10500ATCPISCA (chloroplast-localized IscA-like protein)C.G.S.X.
0.035e-136Populus trichocarpaPtpAffx.216453.1.S1_s_atpmrna31234hypothetical protein-3e-1At1g18380-C.G.S.X.
0.036e-342Triticum aestivumTaAffx.80611.1.S1_atCA694763--1e+0At4g08230glycine-rich proteinC.G.S.X.
0.032e+032Vitis vinifera1611922_atCD799103hypothetical protein LOC100245782-2e-1At3g49770unknown proteinC.G.S.X.
0.023e+032Zea maysZm.9366.1.A1_atBM074292aldo-keto reductase/ oxidoreductase-5e+0At1g06690aldo/keto reductase family proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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