CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At1g18220

Gene name ATPUP9

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
1.00 100.0 At1g18220 838402 ATPUP9 Member of a family of proteins related to PUP1, a purine transporter. May be involved in the transport of purine and purine derivatives such as cytokinins, across the plasma membrane. S.X. H.G.
0.91 95.6 At4g20290 827776 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PFM S.X. H.G.
0.85 92.4 At5g17180 831582 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P S.X. H.G.
0.85 92.4 At4g18500 827582 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P S.X. H.G.
0.81 90.4 At2g14810 815969 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P S.X. H.G.
0.81 90.4 At5g28170 832893 transposable element gene F:unknown;P:unknown;C:unknown S.X. H.G.
0.81 90.4 At4g10410 826633 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P S.X. H.G.
0.77 88.0 At4g18850 827619 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P S.X. H.G.
0.76 87.4 At3g16930 820948 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P S.X. H.G.
0.76 87.4 At5g09340 830793 ubiquitin, putative F:molecular_function unknown;P:protein modification process;C:cellular_component unknown;MPOFV S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
338.5 100.0 GSM253646 Low_Mo_seg_pool_Ler_col_F2 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1
326.6 100.0 GSM143308 Tsu_genomic_hyb_3 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
311.7 100.0 GSM253645 High_Mo_seg_pool_Ler_col_F2 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1
306.2 100.0 GSM143301 Ts_genomic_hyb_2 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
290.6 100.0 GSM143299 High_Na_seg_pool_ts_col_F2 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
287.8 100.0 GSM143309 Tsu_genomic_hyb_2 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
234.9 100.0 GSM184556 Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep2 GSE7631 Cell-specific nitrogen responses in the Arabidopsis root
192.4 100.0 GSM143307 Low_Na_seg_pool_tsu_col_F2 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
188.9 100.0 GSM143300 Ts_genomic_hyb_3 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
184.6 100.0 GSM253647 Col-0 3 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.06 1e-12 71 At2g48100 819422 exonuclease family protein F:exonuclease activity, zinc ion binding, nucleic acid binding;P:biological_process unknown;C:intracellular;MFPOB C.G. S.X.
0.02 6e-2 36 At1g31970 840087 STRS1 (STRESS RESPONSE SUPPRESSOR 1) F:helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding;P:unknown;C:unknown;BOMFPAV C.G. S.X.
0.01 2e-1 34 At4g14250 827066 structural constituent of ribosome F:structural constituent of ribosome;P:translation;C:ribosome, intracellular;MFOPBA C.G. S.X.
0.01 4e+0 30 At5g60320 836154 lectin protein kinase family protein F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 3e-1 34 Glycine max Gma.9082.1.S1_at CA937544 - - 2e-9 At5g20730 NPH4 (NON-PHOTOTROPHIC HYPOCOTYL) C.G. S.X.
0.08 5e-1 32 Hordeum vulgare HVSMEm0017H02r2_at HVSMEm0017H02r2 - - 2e+0 At1g18220 ATPUP9 C.G. S.X.
0.07 5e-1 34 Oryza sativa OsAffx.2478.1.S1_at - - - 0 C.G. S.X.
0.07 1e+0 32 Populus trichocarpa PtpAffx.114309.1.A1_s_at CV272168 hypothetical protein - 2e-4 At2g39140 SVR1 (SUPPRESSOR OF VARIEGATION 1) C.G. S.X.
0.07 4e+0 30 Triticum aestivum TaAffx.22943.1.S1_at CA742843 - - 9e+0 At5g39540 - C.G. S.X.
0.05 3e-1 32 Vitis vinifera 1616935_at CB350131 hypothetical protein LOC100250028 - 1e-30 At2g32070 CCR4-NOT transcription complex protein, putative C.G. S.X.
0.04 7e+0 28 Zea mays Zm.9329.1.A1_at BM351235 - - 5e+0 At5g59870 HTA6 C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
S GO:0006863 The directed movement of purines, one of the two classes of nitrogen-containing ring compounds found in DNA and RNA, into, out of, within or between cells.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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