CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At1g18170

Gene name immunophilin / FKBP-type peptidyl-prolyl cis-trans isomerase family protein

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
0.89 94.6 At1g18170 838396 immunophilin / FKBP-type peptidyl-prolyl cis-trans isomerase family protein F:FK506 binding, peptidyl-prolyl cis-trans isomerase activity;P:protein folding;C:chloroplast thylakoid membrane, chloroplast;BOMPF S.X. H.G.
0.74 86.1 At2g04700 815013 ferredoxin thioredoxin reductase catalytic beta chain family protein F:ferredoxin:thioredoxin reductase activity, ferredoxin reductase activity;P:unknown;C:chloroplast;BOPA S.X. H.G.
0.72 84.8 At1g03680 839436 ATHM1 encodes a chloroplast thioredoxin similar to prokaryotic thioredoxins. S.X. H.G.
0.72 84.8 At4g28030 828918 GCN5-related N-acetyltransferase (GNAT) family protein F:N-acetyltransferase activity;P:metabolic process;C:chloroplast;BPOA S.X. H.G.
0.72 84.8 At1g50320 841454 ATHX encodes a prokaryotic thioredoxin S.X. H.G.
0.70 83.5 At3g51510 824314 unknown protein F:molecular_function unknown;P:biological_process unknown;C:chloroplast thylakoid membrane, chloroplast;PO S.X. H.G.
0.69 82.9 At4g38225 829979 unknown protein F:molecular_function unknown;P:biological_process unknown;C:chloroplast;P S.X. H.G.
0.67 81.6 At1g20810 838672 immunophilin / FKBP-type peptidyl-prolyl cis-trans isomerase family protein F:FK506 binding, peptidyl-prolyl cis-trans isomerase activity;P:protein folding;C:thylakoid lumen, chloroplast thylakoid lumen, chloroplast;BOPMF S.X. H.G.
0.66 80.1 At5g38660 833856 APE1 (ACCLIMATION OF PHOTOSYNTHESIS TO ENVIRONMENT) mutant has Altered acclimation responses; S.X. H.G.
0.65 79.6 At2g30170 817569 catalytic F:catalytic activity;P:biological_process unknown;C:chloroplast;MFOPBA S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
12.9 99.3 GSM133762 Lindsey_1-14_torpedo-root_Rep1_ATH1 GSE5730 Transcriptional profiling of laser-capture micro-dissected embryonic tissues
10.7 99.2 E-MEXP-1304-raw-cel-1530619577
9.2 99.1 GSM131155 AtGen_C-5_2-C-12_REP2_ATH1 GSE5616 AtGenExpress: Response to Phytophthora infestans
9.0 99.1 GSM253645 High_Mo_seg_pool_Ler_col_F2 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1
8.3 99.0 GSM128653 Underwood_1-6_Cor-hrpS-10e6-24h_Rep3_ATH1 GSE5520 Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
8.1 98.9 GSM133759 Lindsey_1-9_heart-stage-cotyledon_Rep3_ATH1 GSE5730 Transcriptional profiling of laser-capture micro-dissected embryonic tissues
7.7 98.9 GSM143299 High_Na_seg_pool_ts_col_F2 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
7.6 98.9 GSM142874 GW001_ATH1_A19-Warre-6dr GSE6177 The effects of the sfr2, sfr3 and sfr6 mutations on lyotropic stress responses
7.5 98.8 E-MEXP-1304-raw-cel-1530619452
7.5 98.8 GSM133059 2507 GSE5685 AtGenExpress: Pathogen Series: Pseudomonas half leaf injection
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.35 7e-18 91 At1g73655 843700 FK506 binding / peptidyl-prolyl cis-trans isomerase F:FK506 binding, peptidyl-prolyl cis-trans isomerase activity;P:protein folding;C:chloroplast;BOPMF C.G. S.X.
0.02 2e-2 40 At5g66640 836796 DAR3 (DA1-RELATED PROTEIN 3) F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POMBF C.G. S.X.
0.03 2e-2 40 At3g51220 824285 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POFMB C.G. S.X.
0.02 9e-2 38 At5g27560 832816 unknown protein F:molecular_function unknown;P:biological_process unknown;C:chloroplast;OBP C.G. S.X.
0.02 4e-1 36 At5g64690 836590 neurofilament triplet H protein-related F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOBFPAV C.G. S.X.
0.02 4e-1 36 At5g06830 830574 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOPABF C.G. S.X.
0.02 4e-1 36 At5g06390 830527 FLA17 (FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 17 PRECURSOR) F:molecular_function unknown;P:cell adhesion;C:vacuole;BPOMFAV C.G. S.X.
0.03 4e-1 36 At3g18360 821365 VQ motif-containing protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPOFBVA C.G. S.X.
0.02 4e-1 36 At2g33560 817921 spindle checkpoint protein-related F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MFPO C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.21 2e-6 54 Glycine max Gma.1462.1.S1_at CD402372 - - 2e-6 At1g18170 immunophilin / FKBP-type peptidyl-prolyl cis-trans isomerase family protein C.G. S.X.
0.08 7e-4 44 Hordeum vulgare Contig11681_at Contig11681 - - 2e-3 At1g18170 immunophilin / FKBP-type peptidyl-prolyl cis-trans isomerase family protein C.G. S.X.
0.03 7e-1 36 Oryza sativa Os01g0914400 AK063138.1 - Conserved hypothetical protein 6e-3 At4g12970 unknown protein C.G. S.X.
0.16 3e-2 40 Populus trichocarpa PtpAffx.62182.1.S1_a_at CV261082 hypothetical protein - 3e-2 At1g18170 immunophilin / FKBP-type peptidyl-prolyl cis-trans isomerase family protein C.G. S.X.
0.04 2e+0 34 Triticum aestivum Ta.19640.1.S1_at CA654797 - - 3e+0 At2g20130 LCV1 (LIKE COV 1) C.G. S.X.
0.12 5e-7 54 Vitis vinifera 1619560_at CD721168 hypothetical protein LOC100247422 - 2e-6 At1g18170 immunophilin / FKBP-type peptidyl-prolyl cis-trans isomerase family protein C.G. S.X.
0.03 6e-1 34 Zea mays Zm.15779.1.A1_at CD484306 - - 7e-2 At3g14670 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
L GO:0006457 The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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