Gene omics information

Query gene ID At1g18100
Gene name E12A11
Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At1g18100838390E12A11E12A11 protein (E12A11)S.X.H.G.
0.9195.6At1g65880842900BZO1 (BENZOYLOXYGLUCOSINOLATE 1)Encodes a benzoate-CoA ligase. Involved in the biosynthesis of benzoyloxyglucosinolate in Arabidopsis seeds.S.X.H.G.
0.8391.4At5g51490835223pectinesterase family proteinF:enzyme inhibitor activity, pectinesterase activity;P:cell wall modification;C:endomembrane system, cell wall, plant-type cell wall;PBFOMS.X.H.G.
0.7888.6At2g25940817135ALPHA-VPE (alpha-vacuolar processing enzyme)Encodes a vacuolar processing enzyme belonging to a novel group of cysteine proteinases that is expressed in vegetative organs and is upregulated in association with various types of cell death and under stressed conditions.S.X.H.G.
0.7687.4At1g73290843663scpl5 (serine carboxypeptidase-like 5)F:serine-type carboxypeptidase activity;P:proteolysis;C:endomembrane system;PMFBOS.X.H.G.
0.7586.9At1g25410839127ATIPT6AB061404 Arabidopsis thaliana AtIPT6 mRNA for cytokinin synthase, complete cdsS.X.H.G.
0.7385.5At5g07500830642PEI1Encodes an embryo-specific zinc finger transcription factor required for heart-stage embryo formation.S.X.H.G.
0.7184.2At3g44460823571DPBF2basic leucine zipper transcription factor (BZIP67), identical to basic leucine zipper transcription factor GI:18656053 from (Arabidopsis thaliana); identical to cDNA basic leucine zipper transcription factor (atbzip67 gene) GI:18656052. Located in the nucleus and expressed during seed maturation in the cotyledons.S.X.H.G.
0.6982.9At4g25980828704cationic peroxidase, putativeF:peroxidase activity;P:response to oxidative stress;C:endomembrane system;PFOMS.X.H.G.
0.6781.6At5g49190834978SUS2 (SUCROSE SYNTHASE 2)Encodes a putative sucrose synthase (SUS2). The activity of the enzyme could not be assayed as proved to be insoluble (PMID 17257168). Induced specifically by O(2) deficiency.S.X.H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
407.7100.0GSM131699ATGE_81_CGSE5634AtGenExpress: Developmental series (siliques and seeds)
391.8100.0GSM131694ATGE_79_AGSE5634AtGenExpress: Developmental series (siliques and seeds)
382.2100.0GSM131696ATGE_79_CGSE5634AtGenExpress: Developmental series (siliques and seeds)
372.5100.0GSM131697ATGE_81_AGSE5634AtGenExpress: Developmental series (siliques and seeds)
349.8100.0GSM131695ATGE_79_BGSE5634AtGenExpress: Developmental series (siliques and seeds)
341.9100.0GSM131698ATGE_81_BGSE5634AtGenExpress: Developmental series (siliques and seeds)
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.013e-136At3g57410824908VLN3 (VILLIN 3)Encodes a protein with high homology to animal villin.C.G.S.X.
0.013e-136At2g41740818773VLN2 (VILLIN 2)Encodes a protein with high homology to animal villin.C.G.S.X.
0.011e+034At5g17910831659unknown proteinF:molecular_function unknown;P:biological_process unknown;C:mitochondrion;MOBFPVAC.G.S.X.
0.031e+034At5g16870831550aminoacyl-tRNA hydrolaseF:aminoacyl-tRNA hydrolase activity;P:translation;C:unknown;OAMFPVBC.G.S.X.
0.041e+034At5g27780832840auxin-responsive family proteinF:molecular_function unknown;P:response to auxin stimulus;C:unknown;PC.G.S.X.
0.011e+034At2g17820816291ATHK1 (histidine kinase 1)Encodes a member of the histidine kinase family.C.G.S.X.
0.041e+034At1g29460839822auxin-responsive protein, putativeF:molecular_function unknown;P:response to auxin stimulus;C:mitochondrion;PC.G.S.X.
0.011e+034At1g73850843721structural constituent of ribosomeF:structural constituent of ribosome;P:translation;C:ribosome, intracellular;OMFPBVC.G.S.X.
0.044e+032At5g62040836324brother of FT and TFL1 protein (BFT)F:phosphatidylethanolamine binding;P:biological_process unknown;C:cellular_component unknown;PMFOVBC.G.S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.124e-446Glycine maxGma.6921.1.S1_atBE823209--4e-4At1g18100E12A11C.G.S.X.
0.103e-548Hordeum vulgareContig6604_atContig6604--1e-4At1g18100E12A11C.G.S.X.
0.041e-448Oryza sativaOs01g0111600AK110620.1-Phosphatidylethanolamine-binding protein familyprotein1e-4At1g18100E12A11C.G.S.X.
0.122e-550Populus trichocarpaPtp.3985.1.S1_atAB181241.1hypothetical protein-2e-5At1g18100E12A11C.G.S.X.
0.103e-446Triticum aestivumTa.25569.1.S1_atBE424859--5e-4At1g18100E12A11C.G.S.X.
0.035e+030Vitis vinifera1611692_atCB343565--4e+0At3g47720SRO4 (SIMILAR TO RCD ONE 4)C.G.S.X.
0.071e-136Zea maysZm.15564.1.A1_atCD446261ZCN11 protein-5e-1At1g18100E12A11C.G.S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

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