Gene omics information

Query gene ID At1g17840
Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At1g17840838363WBC11 (WHITE-BROWN COMPLEX HOMOLOG PROTEIN 11)Encodes a plasma membrane-localized ATP-binding cassette transporter, that is required for cutin transport to the extracellular matrix.S.X.H.G.
0.9296.0At4g25960828702PGP2 (P-GLYCOPROTEIN 2)F:ATPase activity, coupled to transmembrane movement of substances;P:transport;C:membrane;BOMAFPVS.X.H.G.
0.9195.6At2g26910817232PDR4 (PLEIOTROPIC DRUG RESISTANCE 4)F:ATPase activity, coupled to transmembrane movement of substances;P:multidrug transport;C:membrane;BOMFAPVS.X.H.G.
0.9195.6At5g13400831181proton-dependent oligopeptide transport (POT) family proteinF:transporter activity;P:oligopeptide transport;C:membrane;PBMOFS.X.H.G.
0.8089.8At3g61550825328zinc finger (C3HC4-type RING finger) family proteinF:protein binding, zinc ion binding;P:unknown;C:unknown;PMOFVS.X.H.G.
0.7184.2At4g36250829782ALDH3F1 (Aldehyde Dehydrogenase 3F1)Encodes a putative aldehyde dehydrogenase. The gene is not responsive to osmotic stress and is expressed constitutively at a low level in plantlets and root cultures.S.X.H.G.
0.6781.6At2g26250817165KCS10 (3-KETOACYL-COA SYNTHASE 10)epidermis-specific, encodes KCS10, a putative 3-ketoacyl-CoA synthase. probably involved in the synthesis of long-chain lipids found in the cuticle.S.X.H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
26.399.7GSM131175AtGen_D-7_1-UL_REP1_ATH1GSE5617AtGenExpress: Light treatments
22.999.6GSM131187AtGen_D-20_2-RL_REP2_ATH1GSE5617AtGenExpress: Light treatments
22.699.6GSM131203AtGen_D-37_3-BL_REP3_ATH1GSE5617AtGenExpress: Light treatments
22.199.6GSM131172AtGen_D-4_1-RL_REP1_ATH1GSE5617AtGenExpress: Light treatments
21.299.6GSM131200AtGen_D-34_3-FL_REP3_ATH1GSE5617AtGenExpress: Light treatments
20.999.6GSM131190AtGen_D-23_2-UL_REP2_ATH1GSE5617AtGenExpress: Light treatments
20.399.6GSM131173AtGen_D-5_1-BL_REP1_ATH1GSE5617AtGenExpress: Light treatments
20.399.6GSM131170AtGen_D-2_1-FL_REP1_ATH1GSE5617AtGenExpress: Light treatments
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Homologous genes

Paralogous genes

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HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.067e-859At1g51500841575CER5 (ECERIFERUM 5)Encodes an ABC transporter involved in cuticular wax biosynthesis. Lines carrying recessive mutations in this locus have weakly glaucous stem surface, and relative elevated secondary alcohols and ketones.C.G.S.X.
0.063e-448At1g51460841571ABC transporter family proteinF:ATPase activity, coupled to transmembrane movement of substances;P:transport;C:membrane;BOMFAPVC.G.S.X.
0.012e-242At5g49320834992unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PC.G.S.X.
0.017e-240At1g30650839945WRKY14member of WRKY Transcription Factor; Group II-eC.G.S.X.
0.013e-138At4g08160826365glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing proteinEncodes a putative glycosyl hydrolase family 10 protein (xylanase).C.G.S.X.
0.013e-138At1g13740837934AFP2 (ABI FIVE BINDING PROTEIN 2)Encodes a member of a small plant-specific gene family whose members interact with ABI5 and appear to be involved in mediating stress responses. AFP2 mutants affect a number of ABA mediated processes such as germination and response to osmotic and sugar stress. AFP2 nuclear localization is stress dependent.C.G.S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.322e-58228Glycine maxGmaAffx.87119.1.S1_atBM309295--8e-59At1g17840WBC11 (WHITE-BROWN COMPLEX HOMOLOG PROTEIN 11)C.G.S.X.
0.221e-26121Hordeum vulgareContig6704_atContig6704--2e-26At1g17840WBC11 (WHITE-BROWN COMPLEX HOMOLOG PROTEIN 11)C.G.S.X.
0.365e-69264Oryza sativaOs10g0494300AK072452.1-ABC transporter3e-69At1g17840WBC11 (WHITE-BROWN COMPLEX HOMOLOG PROTEIN 11)C.G.S.X.
0.313e-48194Populus trichocarpaPtp.956.1.A1_atCV238436--9e-49At1g17840WBC11 (WHITE-BROWN COMPLEX HOMOLOG PROTEIN 11)C.G.S.X.
0.243e-29131Triticum aestivumTa.8225.1.S1_atCK208464--2e-29At1g17840WBC11 (WHITE-BROWN COMPLEX HOMOLOG PROTEIN 11)C.G.S.X.
0.277e-64244Vitis vinifera1611325_atCF211447hypothetical protein LOC100263167-5e-64At1g17840WBC11 (WHITE-BROWN COMPLEX HOMOLOG PROTEIN 11)C.G.S.X.
0.171e-1997Zea maysZm.8050.1.A1_atCF244335ABC transporter C05D10.3 in chromosome III-2e-19At1g17840WBC11 (WHITE-BROWN COMPLEX HOMOLOG PROTEIN 11)C.G.S.X.
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Biological processes

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ECCGO IDProcess Name
XGO:0080051The directed movement of cutin into, out of, within or between cells. Cutin, which consists of C16-18 fatty acids, is the major component of the cuticle that covers the plant surface.
SGO:0015908The directed movement of fatty acids into, out of, within or between cells. Fatty acids are aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

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