Gene omics information

Query gene ID At1g17600
Gene name disease resistance protein (TIR-NBS-LRR class), putative
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.4457.2At1g17600838336disease resistance protein (TIR-NBS-LRR class), putativeF:transmembrane receptor activity, protein binding, ATP binding;P:signal transduction, defense response, apoptosis, innate immune response;C:intrinsic to membrane;PMBOFAS.X.H.G.
0.4050.8At4g03450827913ankyrin repeat family proteinF:protein binding;P:unknown;C:unknown;MOPFBVAS.X.H.G.
0.3745.0At4g23320828431protein kinase family proteinF:kinase activity;P:protein amino acid phosphorylation;C:unknown;MPOBFVAS.X.H.G.
0.3338.1At4g04220825737AtRLP46 (Receptor Like Protein 46)F:protein binding, kinase activity;P:signal transduction, defense response;C:endomembrane system;PMOBFAVS.X.H.G.
0.2420.7At3g56400824807WRKY70member of WRKY Transcription Factor; Group III. Function as activator of SA-dependent defense genes and a repressor of JA-regulated genes. WRKY70-controlled suppression of JA-signaling is partly executed by NPR1.S.X.H.G.
0.2319.3At4g04540825785protein kinase family proteinF:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVAS.X.H.G.
0.2014.4At5g60900836211RLK1 (RECEPTOR-LIKE PROTEIN KINASE 1)Encodes a receptor-like protein kinase.S.X.H.G.
0.1912.7At1g66880843006serine/threonine protein kinase family proteinF:protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, ATP binding;P:protein amino acid phosphorylation;C:plasma membrane;MPOBFVAS.X.H.G.
0.1912.7At2g46430819251ATCNGC3 (CYCLIC NUCLEOTIDE GATED CHANNEL 3)cyclic nucleotide gated channel (CNGC4), downstream component of the signaling pathways leading to HR/resistanceS.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
308.5100.0GSM184556Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis root
203.9100.0GSM253645High_Mo_seg_pool_Ler_col_F2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
172.9100.0GSM253646Low_Mo_seg_pool_Ler_col_F2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
159.399.9GSM143306High_Na_seg_pool_tsu_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
137.299.9GSM143309Tsu_genomic_hyb_2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
135.199.9GSM143298Low_Na_seg_pool_ts_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
125.299.9GSM253649Col-0-2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
118.199.9GSM143300Ts_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
117.799.9GSM143310Tsu_genomic_hyb_1GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
115.399.9GSM143308Tsu_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.552e-107391At5g40100834007disease resistance protein (TIR-NBS-LRR class), putativeF:protein binding, transmembrane receptor activity, ATP binding;P:signal transduction, defense response, apoptosis, innate immune response;C:plasma membrane, chloroplast envelope;PMBOFAVC.G.S.X.
0.202e-40169At1g72840843615ATP binding / protein binding / transmembrane receptorF:transmembrane receptor activity, protein binding, ATP binding;P:signal transduction, defense response, apoptosis, innate immune response;C:intrinsic to membrane;PMBOFAC.G.S.X.
0.112e-21105At4g09430826526disease resistance protein (TIR-NBS-LRR class), putativeF:transmembrane receptor activity, ATP binding;P:signal transduction, defense response, apoptosis, innate immune response;C:chloroplast;PMBOFAVC.G.S.X.
0.117e-1583At5g48770834935disease resistance protein (TIR-NBS-LRR class), putativeF:transmembrane receptor activity, protein binding, ATP binding;P:signal transduction, defense response, apoptosis, innate immune response;C:intrinsic to membrane;PMBOFAC.G.S.X.
0.151e-1379At1g72860843617disease resistance protein (TIR-NBS-LRR class), putativeF:transmembrane receptor activity, protein binding, ATP binding;P:signal transduction, defense response, apoptosis, innate immune response;C:intrinsic to membrane;PMBOFAC.G.S.X.
0.107e-963At4g09360826518disease resistance protein (NBS-LRR class), putativeF:protein binding, nucleoside-triphosphatase activity, nucleotide binding, ATP binding;P:defense response, apoptosis;C:cellular_component unknown;PMBOFAVC.G.S.X.
0.014e-448At1g72890843620disease resistance protein (TIR-NBS class), putativeF:transmembrane receptor activity, ATP binding;P:signal transduction, defense response, apoptosis, innate immune response;C:intrinsic to membrane;PBMOC.G.S.X.
0.013e-242At5g11250830995disease resistance protein (TIR-NBS-LRR class), putativeF:transmembrane receptor activity, protein binding, ATP binding;P:signal transduction, defense response, apoptosis, innate immune response;C:intrinsic to membrane, chloroplast;PMOBFAVC.G.S.X.
0.011e-140At5g17970831664disease resistance protein (TIR-NBS-LRR class), putativeF:transmembrane receptor activity, protein binding, nucleoside-triphosphatase activity, nucleotide binding, ATP binding;P:signal transduction, defense response, apoptosis, innate immune response;C:intrinsic to membrane;POBMFAVC.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.011e-140Glycine maxGma.8474.1.S1_atAF322633.1L33 protein-5e-4At5g17680disease resistance protein (TIR-NBS-LRR class), putativeC.G.S.X.
0.015e-240Hordeum vulgareContig8436_s_atContig8436--7e-2At5g40950RPL27 (RIBOSOMAL PROTEIN LARGE SUBUNIT 27)C.G.S.X.
0.018e-138Oryza sativaOs12g05595009640.m03617-Resistance protein T10rga2-1A5e-2At4g11040protein phosphatase 2C, putative / PP2C, putativeC.G.S.X.
0.016e-448Populus trichocarpaPtpAffx.225453.1.S1_x_atpmrna44810tir-nbs-lrr resistance protein-5e-2At1g72890disease resistance protein (TIR-NBS class), putativeC.G.S.X.
0.011e-140Triticum aestivumTaAffx.52824.1.S1_atCA700437--1e+0At4g03940unknown proteinC.G.S.X.
0.013e-240Vitis vinifera1608197_atCF512469hypothetical protein LOC100263726-1e+0At3g55515RTFL7 (ROTUNDIFOLIA LIKE 7)C.G.S.X.
0.012e-138Zea maysZm.17521.1.S1_atCK370540complex 1 protein containing protein-2e+0At4g39340unknown proteinC.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
CGO:0006952Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack.
LGO:0006915A form of programmed cell death that begins when a cell receives internal or external signals that trigger the activity of proteolytic caspases, proceeds through a series of characteristic stages typically including rounding-up of the cell, retraction of pseudopodes, reduction of cellular volume (pyknosis), chromatin condensation, nuclear fragmentation (karyorrhexis), and plasma membrane blebbing (but maintenance of its integrity until the final stages of the process), and ends with the death of the cell.
LGO:0007165The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell.
LGO:0045087Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens.
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage