Gene omics information

Query gene ID At1g17300
Gene name unknown protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.6378.1At1g17300838302unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.5773.8At5g45200834556disease resistance protein (TIR-NBS-LRR class), putativeF:transmembrane receptor activity, protein binding, ATP binding;P:signal transduction, defense response, apoptosis, innate immune response;C:intrinsic to membrane;PMBOFAS.X.H.G.
0.3643.6At5g40100834007disease resistance protein (TIR-NBS-LRR class), putativeF:protein binding, transmembrane receptor activity, ATP binding;P:signal transduction, defense response, apoptosis, innate immune response;C:plasma membrane, chloroplast envelope;PMBOFAVS.X.H.G.
0.3338.1At4g31100829237wall-associated kinase, putativeF:kinase activity;P:protein amino acid phosphorylation;C:plasma membrane;MPOBFVAS.X.H.G.
0.2726.2At2g31020817653ORP1A (OSBP(OXYSTEROL BINDING PROTEIN)-RELATED PROTEIN 1A)F:oxysterol binding;P:steroid metabolic process;C:unknown;MFOPBVS.X.H.G.
0.2522.6At1g14390838001leucine-rich repeat transmembrane protein kinase, putativeF:protein binding, protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:endomembrane system;PMOBFVAS.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
456.8100.0GSM253646Low_Mo_seg_pool_Ler_col_F2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
416.5100.0GSM253645High_Mo_seg_pool_Ler_col_F2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
363.3100.0GSM253647Col-0 3GSE10039Low_Mo_Arabidopsis_mapping_MOT1
275.9100.0GSM253649Col-0-2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
256.9100.0GSM143299High_Na_seg_pool_ts_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
244.1100.0GSM253652Ler 2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
235.8100.0GSM253651Ler 1GSE10039Low_Mo_Arabidopsis_mapping_MOT1
230.8100.0GSM143298Low_Na_seg_pool_ts_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
197.6100.0GSM253650Ler 3GSE10039Low_Mo_Arabidopsis_mapping_MOT1
193.5100.0GSM143302Ts_genomic_hyb_1GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.378e-53206At1g172852745753unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PC.G.S.X.
0.141e-45182At1g17290838301AlaAT1 (ALANINE AMINOTRANSFERAS)Encodes for alanine aminotransferase (ALAAT1), involved in alanine catabolism during plants recovery from hypoxiaC.G.S.X.
0.112e-31135At1g72330843565ALAAT2 (ALANINE AMINOTRANSFERASE 2)Encodes for alanine aminotransferase ALAAT2.C.G.S.X.
0.012e-136At5g15700831424DNA-directed RNA polymerase (RPOT2)F:DNA-directed RNA polymerase activity, DNA binding;P:transcription;C:unknown;OFPMVBC.G.S.X.
0.032e-136At5g57700835877BNR/Asp-box repeat family proteinF:unknown;P:biological_process unknown;C:cellular_component unknown;BOPFAC.G.S.X.
0.022e-136At3g24600822056-F:unknown;P:antigen processing and presentation;C:MHC class I protein complex, membrane;PC.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.032e-136Glycine maxGmaAffx.47222.1.S1_atBU760787--4e-1At3g09830protein kinase, putativeC.G.S.X.
0.063e-134Hordeum vulgareHA10K07u_s_atHA10K07u--5e-1At4g36560unknown proteinC.G.S.X.
0.068e-238Oryza sativaOsAffx.11933.1.S1_at---0C.G.S.X.
0.044e+032Populus trichocarpaPtpAffx.52182.1.A1_atCK095232--5e-3At4g27690VPS26B (VACUOLAR PROTEIN SORTING 26B)C.G.S.X.
0.057e-134Triticum aestivumTa.13028.1.S1_atCA484594--7e-1At1g17300unknown proteinC.G.S.X.
0.042e-134Vitis vinifera1611379_atCF207737hypothetical protein LOC100242169-9e-2At5g61500ATG3C.G.S.X.
0.051e+032Zea maysZmAffx.376.1.A1_atAI673923--8e-1At5g18710unknown proteinC.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage