CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At1g17260

Gene name AHA10 (Autoinhibited H(+)-ATPase isoform 10)

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
0.67 81.6 At1g17260 838297 AHA10 (Autoinhibited H(+)-ATPase isoform 10) belongs to H+-APTase gene family, involved in proanthocyanidin biosynthesis, disturbs the vacuolar biogenesis and acidification process S.X. H.G.
1.00 100.0 At3g49270 824088 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;MPO S.X. H.G.
0.89 94.6 At5g47350 834782 palmitoyl protein thioesterase family protein F:palmitoyl-(protein) hydrolase activity;P:protein modification process;C:endomembrane system;MPFO S.X. H.G.
0.80 89.8 At1g24540 839069 CYP86C1 member of CYP86C S.X. H.G.
0.67 81.6 At4g15750 827253 invertase/pectin methylesterase inhibitor family protein F:enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity;P:biological_process unknown;C:endomembrane system;PO S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
503.3 100.0 GSM147964 WT Globular Stage Seed 2 GSE680 Transcript Profiling of Arabidopsis Plant Life Cycle
492.5 100.0 GSM147963 WT Globular Stage Seed 1 GSE680 Transcript Profiling of Arabidopsis Plant Life Cycle
412.1 100.0 GSM147966 lec1-1 Globular Stage Seed 2 GSE1051 Seed development in LEAFY COTYLEDON1 mutants
408.9 100.0 GSM311284 Laser capture microdissected (LCM) general seed coat at the pre-globular stage, biological replicate 2 GSE12402 Expression data from Arabidopsis seed compartments at the pre-globular stage
323.7 100.0 GSM147965 lec1-1 Globular Stage Seed 1 GSE1051 Seed development in LEAFY COTYLEDON1 mutants
286.1 100.0 GSM284398 Arabidopsis GGSc2 GSE11262 Expression data from Arabidopsis Seed Compartments at the Globular Embryo Stage.
230.0 100.0 GSM284397 Arabidopsis GGSc1 GSE11262 Expression data from Arabidopsis Seed Compartments at the Globular Embryo Stage.
228.0 100.0 GSM311283 Laser capture microdissected (LCM) general seed coat at the pre-globular stage, biological replicate 1 GSE12402 Expression data from Arabidopsis seed compartments at the pre-globular stage
211.1 100.0 GSM311285 Laser capture microdissected (LCM) whole seed sections at the pre-globular stage, biological replicate 1 GSE12402 Expression data from Arabidopsis seed compartments at the pre-globular stage
150.9 99.9 GSM311286 Laser capture microdissected (LCM) whole seed sections at the pre-globular stage, biological replicate 2 GSE12402 Expression data from Arabidopsis seed compartments at the pre-globular stage
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.19 3e-26 121 At1g80660 844405 AHA9 F:hydrogen-exporting ATPase activity, phosphorylative mechanism;P:proton transport;C:plasma membrane;BMOFPAV C.G. S.X.
0.20 2e-21 105 At4g30190 829142 AHA2 belongs to the P-type ATPase superfamily of cation-transporting ATPases, pumps protons out of the cell, generating a proton gradient that drives the active transport of nutrients by proton symport. has two autoinhibitory regions within the C-terminal dom C.G. S.X.
0.21 5e-19 97 At2g07560 815329 AHA6 (Arabidopsis H(+)-ATPase 6) F:ATPase activity;P:cation transport, metabolic process, ATP biosynthetic process;C:plasma membrane, membrane;BMOFPAV C.G. S.X.
0.26 3e-17 91 At2g18960 816413 AHA1 (ARABIDOPSIS H+ ATPASE 1) Encodes a plasma membrane proton ATPase. Mutants have a reduced ability to close their stomata in response to drought and are affected in stomatal but not seed responsiveness to ABA. C.G. S.X.
0.18 1e-16 89 At3g60330 825204 AHA7 (Arabidopsis H(+)-ATPase 7) F:hydrogen-exporting ATPase activity, phosphorylative mechanism;P:cation transport, metabolic process, ATP biosynthetic process;C:plasma membrane;BMOFPAV C.G. S.X.
0.18 4e-16 87 At3g42640 823281 AHA8 (Arabidopsis H(+)-ATPase 8) F:ATPase activity;P:cation transport, metabolic process, ATP biosynthetic process;C:plasma membrane, membrane;BMOFPAV C.G. S.X.
0.25 7e-15 83 At5g57350 835841 AHA3 member of Plasma membrane H+-ATPase family C.G. S.X.
0.12 4e-10 67 At3g47950 823950 AHA4 mutant has Slight reduction in root and shoot growth; Exaggerated defects in salt stress; Plasma Membrane H+ ATPase C.G. S.X.
0.12 4e-7 57 At2g24520 816988 AHA5 (Arabidopsis H(+)-ATPase 5) F:ATPase activity;P:cation transport, metabolic process, ATP biosynthetic process;C:plasma membrane;BMOFPAV C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.07 2e-3 46 Glycine max GmaAffx.52594.1.S1_at BE058579 - - 3e-4 At1g17260 AHA10 (Autoinhibited H(+)-ATPase isoform 10) C.G. S.X.
0.19 4e-30 133 Hordeum vulgare Contig680_at Contig680 - - 1e-99 At4g30190 AHA2 C.G. S.X.
0.27 4e-30 135 Oryza sativa Os03g0183900 9631.m00801 - ATPase 10, plasma membrane-type (EC 3.6.3.6)(Proton pump 10) 2e-30 At1g17260 AHA10 (Autoinhibited H(+)-ATPase isoform 10) C.G. S.X.
0.23 2e-13 79 Populus trichocarpa PtpAffx.203463.1.S1_at pmrna6897 autoinhibited H+ ATPase - 1e-44 At3g42640 AHA8 (Arabidopsis H(+)-ATPase 8) C.G. S.X.
0.18 2e-30 135 Triticum aestivum Ta.28364.1.S1_at AY543630.1 plasma membrane H+-ATPase - 1e-97 At4g30190 AHA2 C.G. S.X.
0.23 5e-53 208 Vitis vinifera 1613872_at CF209350 hypothetical protein LOC100265284 - 1e-52 At1g17260 AHA10 (Autoinhibited H(+)-ATPase isoform 10) C.G. S.X.
0.20 2e-28 127 Zea mays Zm.13376.1.S1_s_at X85805.1 plasma-membrane H+ATPase2 /// proton-exporting ATPase - 2e-95 At4g30190 AHA2 C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
X GO:0007033 A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a vacuole.
X GO:0007035 Any process that reduces the pH of the vacuole, measured by the concentration of the hydrogen ion.
X GO:0010023 The chemical reactions and pathways resulting in the formation of proanthocyanidin.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
00190 Oxidative phosphorylation
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