CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At1g17180

Gene name ATGSTU25 (GLUTATHIONE S-TRANSFERASE TAU 25)

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
0.45 58.3 At1g17180 838289 ATGSTU25 (GLUTATHIONE S-TRANSFERASE TAU 25) Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002). S.X. H.G.
0.77 88.0 At4g00080 828192 UNE11 (unfertilized embryo sac 11) F:enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity;P:double fertilization forming a zygote and endosperm;C:endomembrane system;P S.X. H.G.
0.73 85.5 At1g73340 843669 electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding F:electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding;P:unknown;C:unknown;MPFBOAV S.X. H.G.
0.73 85.5 At4g37160 829870 sks15 (SKU5 Similar 15) F:oxidoreductase activity, copper ion binding;P:unknown;C:endomembrane system;FBPMOA S.X. H.G.
0.68 82.2 At3g04320 819587 endopeptidase inhibitor F:endopeptidase inhibitor activity;P:biological_process unknown;C:endomembrane system;P S.X. H.G.
0.65 79.6 At1g14080 837968 FUT6 (FUCOSYLTRANSFERASE 6) member of Xyloglucan fucosyltransferase family S.X. H.G.
0.63 78.1 At1g52060 841635 - F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PMOB S.X. H.G.
0.63 78.1 At1g52070 841636 jacalin lectin family protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PMOB S.X. H.G.
0.62 77.3 At1g12740 837830 CYP87A2 encodes a protein with cytochrome P450 domain S.X. H.G.
0.60 75.7 At5g60520 836173 late embryogenesis abundant protein-related / LEA protein-related F:molecular_function unknown;P:unknown;C:endomembrane system;P S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
122.5 99.9 GSM184478 Lateral Root Cap root cells 2hr KCl control treated, biological rep3 GSE7631 Cell-specific nitrogen responses in the Arabidopsis root
83.5 99.9 GSM184911 Arabidopsis, root cells, columella root cap, 140 mM NaCl, replicate 2 GSE7641 Expression analysis of root cell-types after treatment with salt
73.9 99.9 GSM184477 Lateral Root Cap root cells 2hr KCl control treated, biological rep2 GSE7631 Cell-specific nitrogen responses in the Arabidopsis root
64.8 99.8 GSM184907 Arabidopsis, root cells, epidermis and lateral root cap, 140 mM NaCl, replicate 1 GSE7641 Expression analysis of root cell-types after treatment with salt
64.3 99.8 GSM184838 Arabidopsis, root, longitudinal zone 4, standard conditions, replicate 8 GSE7639 Expression analysis of root developmental zones after treatment with salt
63.2 99.8 GSM266667 Arabidopsis, root cells, columella root cap, -Fe, replicate 2 GSE10501 Expression analysis of root cell-types after iron deficiency (-Fe) treatment
62.0 99.8 GSM184910 Arabidopsis, root cells, columella root cap, 140 mM NaCl, replicate 1 GSE7641 Expression analysis of root cell-types after treatment with salt
61.0 99.8 GSM184837 Arabidopsis, root, longitudinal zone 4, standard conditions, replicate 7 GSE7639 Expression analysis of root developmental zones after treatment with salt
60.1 99.8 GSM184484 Lateral Root Cap root cells 2hr continuous KNO3 treated, biological rep3 GSE7631 Cell-specific nitrogen responses in the Arabidopsis root
59.9 99.8 GSM184483 Lateral Root Cap root cells 2hr continuous KNO3 treated, biological rep2 GSE7631 Cell-specific nitrogen responses in the Arabidopsis root
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.68 6e-52 204 At1g17170 838288 ATGSTU24 (GLUTATHIONE S-TRANSFERASE TAU 24) Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002). C.G. S.X.
0.54 1e-25 117 At1g78380 844174 ATGSTU19 (GLUTATHIONE S-TRANSFERASE TAU 19) Encodes a glutathione transferase that is a member of Tau GST gene family. Expression is induced by drought stress, oxidative stress, and high doses of auxin and cytokinin. naming convention according to Wagner et al. (2002) The expression of this gene is upregulated by herbicide safeners such as benoxacor and fenclorim. C.G. S.X.
0.49 4e-22 105 At1g78360 844172 ATGSTU21 (GLUTATHIONE S-TRANSFERASE TAU 21) Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002). C.G. S.X.
0.23 1e-16 87 At1g78340 844169 ATGSTU22 (GLUTATHIONE S-TRANSFERASE TAU 22) Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002). C.G. S.X.
0.19 1e-9 63 At1g17190 838290 ATGSTU26 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 26) Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002). C.G. S.X.
0.23 6e-9 61 At1g78370 844173 ATGSTU20 (GLUTATHIONE S-TRANSFERASE TAU 20) Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002). C.G. S.X.
0.07 2e-8 59 At3g43800 823491 ATGSTU27 (GLUTATHIONE S-TRANSFERASE TAU 27) Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002). C.G. S.X.
0.27 9e-8 57 At1g78320 844167 ATGSTU23 (GLUTATHIONE S-TRANSFERASE TAU 23) Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002). C.G. S.X.
0.09 9e-8 57 At1g53680 841805 ATGSTU28 (GLUTATHIONE S-TRANSFERASE TAU 28) Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002). C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.18 5e-10 65 Glycine max Gma.620.1.S1_at CA820071 glutathione transferase - 6e-10 At1g17180 ATGSTU25 (GLUTATHIONE S-TRANSFERASE TAU 25) C.G. S.X.
0.04 1e+1 30 Hordeum vulgare Contig7448_at Contig7448 - - 1e-1 At1g78340 ATGSTU22 (GLUTATHIONE S-TRANSFERASE TAU 22) C.G. S.X.
0.02 1e+1 32 Oryza sativa Os03g0665301 NM_187970.1 - - 1e+1 At5g57000 unknown protein C.G. S.X.
0.15 2e-6 54 Populus trichocarpa PtpAffx.3457.1.A1_at DN490213 - - 6e-7 At1g17180 ATGSTU25 (GLUTATHIONE S-TRANSFERASE TAU 25) C.G. S.X.
0.04 3e-1 36 Triticum aestivum TaAffx.28408.1.S1_at CA660552 - - 7e-1 At2g35290 unknown protein C.G. S.X.
0.16 7e-9 59 Vitis vinifera 1613204_at AF501625.1 glutathione-S-transferase /// hypothetical protein LOC100249549 /// hypothetical LOC100267917 - 4e-8 At1g17180 ATGSTU25 (GLUTATHIONE S-TRANSFERASE TAU 25) C.G. S.X.
0.03 2e+0 32 Zea mays ZmAffx.1026.1.S1_at AI881620 Hypothetical protein LOC100193718 - 8e-1 At1g55660 F-box family protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
S GO:0009407 The chemical reactions and pathways resulting in the breakdown of toxin, a poisonous compound (typically a protein) that is produced by cells or organisms and that can cause disease when introduced into the body or tissues of an organism.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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