Gene omics information

Query gene ID At1g16380
Gene name ATCHX1
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At1g16380838208ATCHX1member of Putative Na+/H+ antiporter familyS.X.H.G.
0.8693.1At1g67540843075unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.6781.6At3g23270821906regulator of chromosome condensation (RCC1) family proteinF:chromatin binding, phosphoinositide binding, Ran GTPase binding;P:signal transduction;C:cellular_component unknown;MOPBFAVS.X.H.G.
0.6781.6At5g19610832081sec7 domain-containing proteinF:ARF guanyl-nucleotide exchange factor activity;P:regulation of ARF protein signal transduction;C:intracellular;MFOPBS.X.H.G.
0.6075.7At1g68090843137ANN5Encodes a calcium-binding protein annexin (AnnAt5).S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
272.6100.0GSM143308Tsu_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
271.0100.0GSM143306High_Na_seg_pool_tsu_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
247.3100.0GSM253648Col-0-1GSE10039Low_Mo_Arabidopsis_mapping_MOT1
245.7100.0GSM253645High_Mo_seg_pool_Ler_col_F2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
237.1100.0GSM253650Ler 3GSE10039Low_Mo_Arabidopsis_mapping_MOT1
235.4100.0GSM253651Ler 1GSE10039Low_Mo_Arabidopsis_mapping_MOT1
229.8100.0GSM253647Col-0 3GSE10039Low_Mo_Arabidopsis_mapping_MOT1
223.4100.0GSM253646Low_Mo_seg_pool_Ler_col_F2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
222.2100.0GSM205435Col_ leaf_ wildtype_rep02GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
215.1100.0GSM253652Ler 2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.497e-70266At1g79400844278ATCHX2 (CATION/H+ EXCHANGER 2)member of Putative Na+/H+ antiporter familyC.G.S.X.
0.011e-656At5g41610834163ATCHX18member of Putative Na+/H+ antiporter familyC.G.S.X.
0.015e+034At5g03070831675IMPA-9 (IMPORTIN ALPHA ISOFORM 9)Putative importin alpha isoform. When overexpressed can rescue the impa-4 decreased transformation susceptibility phenotype.C.G.S.X.
0.015e+034At5g65950836725unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MFOPC.G.S.X.
0.015e+034At5g06830830574unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOPABFC.G.S.X.
0.015e+034At5g11380831009DXPS3 (1-deoxy-D-xylulose 5-phosphate synthase 3)Encodes a protein postulated to have 1-deoxy-D-xylulose 5-phosphate synthase activity.C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.011e-140Glycine maxGmaAffx.62723.1.A1_atBG316241--4e-15At4g30270MERI5B (meristem-5)C.G.S.X.
0.012e+034Hordeum vulgareHVSMEf0019H05r2_atHVSMEf0019H05r2--6e+0At5g47050protein binding / zinc ion bindingC.G.S.X.
0.014e-242Oryza sativaOs05g0120100AK060437.1--1e-17At2g37340RSZ33C.G.S.X.
0.012e+036Populus trichocarpaPtpAffx.201420.1.S1_atpmrna2805AP2/ERF domain-containing transcription factor-5e-7At5g19790RAP2.11 (related to AP2 11)C.G.S.X.
0.011e+036Triticum aestivumTaAffx.7677.1.S1_atCA653698--7e-1At5g02000unknown proteinC.G.S.X.
0.016e+032Vitis vinifera1619841_atCD800826hypothetical protein LOC100256746-3e-23At1g15960NRAMP6C.G.S.X.
0.012e+034Zea maysZm.6732.4.S1_atAY105066.1hypothetical protein LOC100193321-1e-2At4g10110RNA recognition motif (RRM)-containing proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
SGO:0006812The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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