CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At1g16090

Gene name WAKL7 (wall associated kinase-like 7)

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
0.44 57.2 At1g16090 838179 WAKL7 (wall associated kinase-like 7) WAK-like kinase S.X. H.G.
0.29 30.3 At2g21910 816727 CYP96A5 member of CYP96A S.X. H.G.
0.29 30.3 At4g18540 827586 unknown protein F:unknown;P:biological_process unknown;C:unknown;FPBM S.X. H.G.
0.13 5.8 At1g68765 843208 IDA (INFLORESCENCE DEFICIENT IN ABSCISSION) Encodes a small protein of 77 amino acids. Loss of function mutations are defective in the process of ethylene independent floral organ abscission. Although the mutants have a normal appearing abscission zone, the floral organs do not abscisce. The peptide appears to be secreted and may function as a ligand. Arabidopsis 35S:IDA lines constitutively overexpressing IDA exhibit earlier abscission of floral organs, showing that the abscission zones are responsive to IDA soon after the opening of the flowers. In addition, ectopic abscission was observed at the bases of the pedicel, branches of the inflorescence, and cauline leaves. The silique valves also dehisced prematurely. S.X. H.G.
0.13 5.8 At2g40740 818669 WRKY55 member of WRKY Transcription Factor; Group III S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
402.9 100.0 E-MEXP-807-raw-cel-1173273252
274.4 100.0 E-MEXP-807-raw-cel-1173272948
240.0 100.0 GSM253645 High_Mo_seg_pool_Ler_col_F2 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1
229.4 100.0 GSM13780 Cycloheximide GSE911 Identification of LEAFY targets during reproductive transition
208.4 100.0 GSM13784 Cycloheximide - replicate GSE911 Identification of LEAFY targets during reproductive transition
177.9 100.0 GSM13779 Dexamethasone plus cycloheximide GSE911 Identification of LEAFY targets during reproductive transition
170.7 100.0 GSM253646 Low_Mo_seg_pool_Ler_col_F2 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1
136.1 99.9 GSM143301 Ts_genomic_hyb_2 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
129.3 99.9 GSM143309 Tsu_genomic_hyb_2 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
119.1 99.9 GSM143307 Low_Na_seg_pool_tsu_col_F2 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.02 2e-3 44 At1g16130 838182 WAKL2 (wall associated kinase-like 2) wall-associated kinase like C.G. S.X.
0.02 3e-2 40 At3g59230 825092 F-box family protein F:unknown;P:unknown;C:cellular_component unknown;P C.G. S.X.
0.01 1e-1 38 At3g20200 821564 protein kinase family protein F:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation, response to stress;C:cellular_component unknown;MPOBFVA C.G. S.X.
0.01 1e-1 38 At1g16120 838181 WAKL1 (wall associated kinase-like 1) wall-associated kinase like C.G. S.X.
0.01 5e-1 36 At5g59810 836102 SBT5.4 F:identical protein binding, serine-type endopeptidase activity;P:proteolysis, negative regulation of catalytic activity;C:unknown;BPOFAM C.G. S.X.
0.01 5e-1 36 At4g23940 828494 FtsH protease, putative F:in 7 functions;P:proteolysis;C:chloroplast;OBMFPAV C.G. S.X.
0.02 5e-1 36 At3g08660 820013 phototropic-responsive protein, putative F:protein binding, signal transducer activity;P:response to light stimulus, N-terminal protein myristoylation;C:chloroplast;PM C.G. S.X.
0.01 2e+0 34 At5g45140 834550 NRPC2 Encodes a subunit of RNA polymerase III (aka RNA polymerase C). C.G. S.X.
0.02 2e+0 34 At5g19260 832046 unknown protein F:unknown;P:unknown;C:unknown;MOFPBV C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 2e-1 38 Glycine max Gma.15856.1.S1_at BE658716 - - 5e+0 Atmg01120 - C.G. S.X.
0.03 1e-2 40 Hordeum vulgare Contig11090_at Contig11090 - - 2e-6 At2g47710 universal stress protein (USP) family protein C.G. S.X.
0.02 2e-1 38 Oryza sativa Os.10294.1.S1_at - - - 0 C.G. S.X.
0.03 3e+0 34 Populus trichocarpa PtpAffx.221186.1.S1_at pmrna37866 hypothetical protein - 3e-7 At1g45231 - C.G. S.X.
0.03 8e+0 32 Triticum aestivum TaAffx.85528.1.S1_at CA621995 - - 1e+0 At1g16090 WAKL7 (wall associated kinase-like 7) C.G. S.X.
0.02 2e+0 32 Vitis vinifera 1613848_at CF568786 - - 4e-9 At3g55520 immunophilin, putative / FKBP-type peptidyl-prolyl cis-trans isomerase, putative C.G. S.X.
0.02 3e+0 32 Zea mays Zm.8600.1.A1_at AY107085.1 - - 6e-2 At5g52200 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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