CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At1g15210

Gene name PDR7 (PLEIOTROPIC DRUG RESISTANCE 7)

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
0.52 67.4 At1g15210 838087 PDR7 (PLEIOTROPIC DRUG RESISTANCE 7) F:ATPase activity, coupled to transmembrane movement of substances;P:multidrug transport;C:plasma membrane, chloroplast, membrane;BOMFAPV S.X. H.G.
0.86 93.1 At2g27000 817242 CYP705A8 member of CYP705A S.X. H.G.
0.77 88.0 At5g17330 831599 GAD Encodes one of two isoforms of glutamate decarboxylase. S.X. H.G.
0.67 81.6 At5g39970 833994 catalytic F:catalytic activity;P:biological_process unknown;C:anchored to membrane;OBPMAF S.X. H.G.
0.55 70.6 At5g51060 835179 RHD2 (ROOT HAIR DEFECTIVE 2) RHD2 (along with RHD3 and RHD4) is required for normal root hair elongation. Has NADPH oxidase activity. Gene is expressed in the elongation and differention zone in trichoblasts and elongating root hairs. RDH2 is localized to the growing tips of root hair cells. It is required for the production of reactive oxygen species in response to extracellular ATP stimulus. The increase in ROS production stimulates Ca2+ influx. S.X. H.G.
0.50 65.3 At2g14100 815896 CYP705A13 a member of the cytochrome P450 family S.X. H.G.
0.47 61.2 At4g30170 829140 peroxidase, putative F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFOB S.X. H.G.
0.42 53.9 At1g69810 843317 WRKY36 member of WRKY Transcription Factor; Group II-b S.X. H.G.
0.29 30.3 At1g22440 838850 alcohol dehydrogenase, putative F:oxidoreductase activity, binding, catalytic activity, zinc ion binding;P:oxidation reduction, metabolic process;C:cellular_component unknown;BOPFMAV S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
40.7 99.8 GSM265423 Arabidopsis, root, longitudinal zone 3, standard conditions, rep 2 GSE10497 Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
38.0 99.8 GSM133983 Birnbaum_1-13_StageIII-2_Rep2_ATH1 GSE5749 A gene expression map of the Arabidopsis root
36.8 99.7 GSM184520 Pericycle root cells 2hr continuous KNO3 and MSX treated, biological rep2 GSE7631 Cell-specific nitrogen responses in the Arabidopsis root
35.6 99.7 GSM184900 Arabidopsis, root cells, endodermis and quiescent center, standard conditions, replicate 3 GSE7641 Expression analysis of root cell-types after treatment with salt
34.4 99.7 GSM184895 Arabidopsis, root cells, cortex, standard conditions, replicate 1 GSE7641 Expression analysis of root cell-types after treatment with salt
33.0 99.7 GSM184918 Arabidopsis, root cells, endodermis and quiescent center, 140 mM NaCl, replicate 3 GSE7641 Expression analysis of root cell-types after treatment with salt
32.5 99.7 GSM265430 Arabidopsis, root, longitudinal zone 3, -Fe conditions, rep 1 GSE10497 Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
32.3 99.7 GSM184516 Pericycle root cells 2hr continuous KCl and MSX control treated, biological rep1 GSE7631 Cell-specific nitrogen responses in the Arabidopsis root
31.1 99.7 GSM184509 Pericycle root cells 2hr continuous KNO3 treated, biological rep1 GSE7631 Cell-specific nitrogen responses in the Arabidopsis root
30.5 99.7 GSM265431 Arabidopsis, root, longitudinal zone 3, -Fe conditions, rep 2 GSE10497 Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.69 0 1144 At1g59870 842281 PEN3 (PENETRATION 3) ATP binding cassette transporter. Localized to the plasma membrane in uninfected cells. In infected leaves, the protein concentrated at infection sites. Contributes to nonhost resistance to inappropriate pathogens that enter by direct penetration in a salicylic acid�dependent manner. Required for mlo resistance. Has Cd transporter activity (Cd2+ extrusion pump) and contributes to heavy metal resistance. C.G. S.X.
0.26 5e-35 151 At3g16340 820881 PDR1 F:ATPase activity, coupled to transmembrane movement of substances;P:multidrug transport;C:plasma membrane;BOMFAPV C.G. S.X.
0.07 4e-20 101 At2g29940 817544 PDR3 (PLEIOTROPIC DRUG RESISTANCE 3) F:ATPase activity, coupled to transmembrane movement of substances;P:multidrug transport;C:membrane;BOMAFPV C.G. S.X.
0.09 2e-16 89 At3g30842 822863 PDR10 (PLEIOTROPIC DRUG RESISTANCE 10) F:nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding;P:multidrug transport;C:membrane;BOMFAPV C.G. S.X.
0.05 4e-14 81 At4g15236 827189 ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide binding F:nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding;P:unknown;C:membrane;BOMAFPV C.G. S.X.
0.06 2e-13 79 At3g53480 824516 PDR9 (PLEIOTROPIC DRUG RESISTANCE 9) F:ATPase activity, coupled to transmembrane movement of substances;P:multidrug transport;C:plasma membrane;BOMAFPV C.G. S.X.
0.03 2e-13 79 At1g15520 838122 PDR12 (PLEIOTROPIC DRUG RESISTANCE 12) ABC transporter family involved in resistant to lead. Localizes to plasma membrane. Upregulated by lead. Expressed in leaves, flowers. Not expressed in roots. C.G. S.X.
0.03 6e-13 77 At4g15230 827187 PDR2 (PLEIOTROPIC DRUG RESISTANCE 2) F:ATPase activity, coupled to transmembrane movement of substances;P:multidrug transport;C:membrane;BOMAFPV C.G. S.X.
0.07 4e-11 71 At2g36380 818211 PDR6 F:ATPase activity, coupled to transmembrane movement of substances;P:transport;C:plasma membrane;BOMAFPV C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.07 2e-20 103 Glycine max Gma.17345.1.S1_at BM732305 - - 2e-25 At1g59870 PEN3 (PENETRATION 3) C.G. S.X.
0.05 2e-5 52 Hordeum vulgare Contig10182_at Contig10182 - - 3e-16 At1g15520 PDR12 (PLEIOTROPIC DRUG RESISTANCE 12) C.G. S.X.
0.11 6e-27 125 Oryza sativa Os06g0554800 AK121182.1 - ABC transporter (PDR5-like) isolog (PDR1 ABCtransporter) 8e-34 At3g16340 PDR1 C.G. S.X.
0.24 4e-55 218 Populus trichocarpa PtpAffx.202964.1.S1_at pmrna5868 hypothetical protein - 3e-52 At1g59870 PEN3 (PENETRATION 3) C.G. S.X.
0.08 4e-8 61 Triticum aestivum Ta.9385.3.S1_at BJ316701 - - 2e-26 At1g15520 PDR12 (PLEIOTROPIC DRUG RESISTANCE 12) C.G. S.X.
0.01 2e-1 38 Vitis vinifera 1620805_at CB344295 - - 1e-21 Atcg00650 - C.G. S.X.
0.02 4e-3 44 Zea mays Zm.16899.1.A1_at BM332843 - - 2e-15 At3g16340 PDR1 C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
C GO:0006855 The directed movement of drugs across a membrane into, out of, within or between cells.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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