Gene omics information

Query gene ID At1g15120
Gene name ubiquinol-cytochrome C reductase complex 7.8 kDa protein, putative / mitochondrial hinge protein, putative
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.2217.5At1g15120838075ubiquinol-cytochrome C reductase complex 7.8 kDa protein, putative / mitochondrial hinge protein, putativeF:ubiquinol-cytochrome-c reductase activity;P:mitochondrial electron transport, ubiquinol to cytochrome c;C:mitochondrion, mitochondrial respiratory chain complex III;MPOFS.X.H.G.
0.4355.3At4g00585828026unknown proteinF:molecular_function unknown;P:photorespiration;C:mitochondrial membrane, respiratory chain complex I;PFMOS.X.H.G.
0.4050.8At1g08480837369unknown proteinF:molecular_function unknown;P:biological_process unknown;C:mitochondrion, plasma membrane, plastid, vacuole;PS.X.H.G.
0.3846.7At1g22840838889CYTC-1 (CYTOCHROME C-1)Encodes cytochrome c. Contains two site II (TGGGCC/T) elements, which interact with a TCP-domain transcription factor, and a downstream internal telomeric repeat, and are required for expression of the Cytc-1 gene. Promoter directs preferential expression in root and shoot meristems and in anthers.S.X.H.G.
0.2420.7At1g67350843056unknown proteinF:molecular_function unknown;P:photorespiration;C:mitochondrial membrane, respiratory chain complex I;PS.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
26.999.7GSM173442wild-type Arabidopsis, biological rep1GSE7211A polyadenylation factor subunit implicated in regulating oxidative stress responses in Arabidopsis thaliana
24.499.6GSM173444wild-type Arabidopsis, biological rep3GSE7211A polyadenylation factor subunit implicated in regulating oxidative stress responses in Arabidopsis thaliana
23.799.6GSM173443wild-type Arabidopsis, biological rep2GSE7211A polyadenylation factor subunit implicated in regulating oxidative stress responses in Arabidopsis thaliana
19.899.6GSM173447oxt6 mutant, biological rep3GSE7211A polyadenylation factor subunit implicated in regulating oxidative stress responses in Arabidopsis thaliana
17.799.5GSM173445oxt6 mutant, biological rep1GSE7211A polyadenylation factor subunit implicated in regulating oxidative stress responses in Arabidopsis thaliana
15.299.4GSM252674Regenerating Stump of Root Tip Cut at 130 mm first and then Recut after 5 hrs Taking 70 mm of Stump (4dpg) rep4GSE9996Organ regeneration in plants is independent of stem cell niche activity
12.499.3GSM173446oxt6 mutant, biological rep2GSE7211A polyadenylation factor subunit implicated in regulating oxidative stress responses in Arabidopsis thaliana
11.499.3GSM218284At_Standard_Col-2GSE8787Expression analysis of the salt stress response in Arabidopsis mutants with defects in hair patterning
9.499.1GSM184555Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis root
9.399.1GSM218297At_NaCl_scm-1GSE8787Expression analysis of the salt stress response in Arabidopsis mutants with defects in hair patterning
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.651e-44178At2g01090814638ubiquinol-cytochrome C reductase complex 7.8 kDa protein, putative / mitochondrial hinge protein, putativeF:ubiquinol-cytochrome-c reductase activity;P:mitochondrial electron transport, ubiquinol to cytochrome c;C:mitochondrial respiratory chain complex III;POMFC.G.S.X.
0.013e-238At3g48770824038ATP binding / DNA bindingF:DNA binding, ATP binding;P:biological_process unknown;C:chloroplast;PMBOFAC.G.S.X.
0.051e-136At3g26235822225unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknownC.G.S.X.
0.014e-134At5g14270831277ATBET9 (Arabidopsis thaliana Bromodomain and Extraterminal Domain protein 9)F:DNA binding;P:unknown;C:unknown;MOBFPVAC.G.S.X.
0.014e-134At5g49730835036ATFRO6 (FERRIC REDUCTION OXIDASE 6)Encodes a plasma membrane-located ferric chelate reductase. Its mRNA is expressed in green aerial tissues (shoot, flower and cotyledon) in a light- and cell differentiation-specific manner.C.G.S.X.
0.024e-134At1g03050839416epsin N-terminal homology (ENTH) domain-containing protein / clathrin assembly protein-relatedF:phospholipid binding, clathrin binding, binding, phosphatidylinositol binding;P:N-terminal protein myristoylation, clathrin coat assembly;C:clathrin coat;MOPFBVAC.G.S.X.
0.022e+032At5g60610836182F-box family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PC.G.S.X.
0.022e+032At5g16700831531glycosyl hydrolase family 5 protein / cellulase family proteinF:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:cellular_component unknown;BPFOAC.G.S.X.
0.012e+032At5g51800835255-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMFOBVAC.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.236e-1373Glycine maxGma.7569.1.S1_atCD413554--4e-26At2g01090ubiquinol-cytochrome C reductase complex 7.8 kDa protein, putative / mitochondrial hinge protein, putativeC.G.S.X.
0.193e-1269Hordeum vulgareContig8737_atContig8737--2e-11At1g15120ubiquinol-cytochrome C reductase complex 7.8 kDa protein, putative / mitochondrial hinge protein, putativeC.G.S.X.
0.252e-756Oryza sativaOs11g0162200AK060396.1--3e-7At1g15120ubiquinol-cytochrome C reductase complex 7.8 kDa protein, putative / mitochondrial hinge protein, putativeC.G.S.X.
0.353e-27121Populus trichocarpaPtpAffx.42648.1.S1_atCV260478hypothetical protein-7e-27At1g15120ubiquinol-cytochrome C reductase complex 7.8 kDa protein, putative / mitochondrial hinge protein, putativeC.G.S.X.
0.182e-342Triticum aestivumTa.13192.1.S1_x_atBJ281023--5e-3At1g15120ubiquinol-cytochrome C reductase complex 7.8 kDa protein, putative / mitochondrial hinge protein, putativeC.G.S.X.
0.212e-959Vitis vinifera1617827_atBQ792603hypothetical protein LOC100253774-2e-8At1g15120ubiquinol-cytochrome C reductase complex 7.8 kDa protein, putative / mitochondrial hinge protein, putativeC.G.S.X.
0.153e-650Zea maysZm.10640.1.S1_atAY107547.1--2e-5At1g15120ubiquinol-cytochrome C reductase complex 7.8 kDa protein, putative / mitochondrial hinge protein, putativeC.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
CGO:0006122The transfer of electrons from ubiquinol to cytochrome c that occurs during oxidative phosphorylation, mediated by the multisubunit enzyme known as complex III.
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
00190Link to KEGG PATHWAYOxidative phosphorylation
01100Link to KEGG PATHWAYMetabolic pathways
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage