CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At1g15010

Gene name unknown protein

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
0.50 65.3 At1g15010 838066 unknown protein F:molecular_function unknown;P:biological_process unknown;C:unknown;PB S.X. H.G.
0.80 89.8 At2g27690 817315 CYP94C1 Encodes a CYP94C1. Has highest omega-hydroxylase activity with 9,10-epoxystearic acid, while also metabolized lauric acid (C12:0) and C18 unsaturated fatty acids. Gene expression is induced in response to wounding and jasmonic acid treatment. S.X. H.G.
0.67 81.6 At4g32800 829416 AP2 domain-containing transcription factor TINY, putative encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. S.X. H.G.
0.57 73.8 At2g34930 818058 disease resistance family protein F:protein binding;P:signal transduction, defense response to fungus, defense response;C:cell wall;PMOBFAV S.X. H.G.
0.33 38.1 At1g17420 838314 LOX3 Lipoxygenase S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
138.8 99.9 GSM131117 AtGen_B-3_1-3-1_REP_1_ATH1 GSE5615 AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitors
130.3 99.9 E-MEXP-98-raw-cel-320189024
105.8 99.9 E-MEXP-98-raw-cel-320188804
92.5 99.9 E-MEXP-98-raw-cel-320188859
91.8 99.9 GSM142878 GW001_ATH1_A23-Warre-03f GSE6177 The effects of the sfr2, sfr3 and sfr6 mutations on lyotropic stress responses
87.3 99.9 GSM131116 AtGen_B-2_1-2-1_REP_1_ATH1 GSE5615 AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitors
85.8 99.9 GSM128713 Thorlby_1-2_3h-post-freeze_REP3_ATH1 GSE5524 Gene Expression During Recovery from Freezing
83.9 99.9 GSM142879 GW001_ATH1_A24-Warre-03f GSE6177 The effects of the sfr2, sfr3 and sfr6 mutations on lyotropic stress responses
81.5 99.9 GSM205185 protoplast_KIN10_rep2 GSE8257 Identification of KIN10-target genes in Arabidopsis mesophyll cells
77.4 99.9 GSM131131 AtGen_B-17_2-3-1_REP2_ATH1 GSE5615 AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitors
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.32 7e-23 107 At2g01300 814658 unknown protein F:molecular_function unknown;P:biological_process unknown;C:unknown;P C.G. S.X.
0.02 2e-1 36 At3g17760 821044 GAD5 (glutamate decarboxylase 5) F:calmodulin binding;P:carboxylic acid metabolic process, glutamate metabolic process, glutamate decarboxylation to succinate;C:cellular_component unknown;BFPOMAV C.G. S.X.
0.04 2e-1 36 At2g31730 817730 ethylene-responsive protein, putative F:transcription factor activity;P:response to ethylene stimulus, response to gibberellin stimulus;C:nucleus;P C.G. S.X.
0.01 8e-1 34 At5g59810 836102 SBT5.4 F:identical protein binding, serine-type endopeptidase activity;P:proteolysis, negative regulation of catalytic activity;C:unknown;BPOFAM C.G. S.X.
0.02 8e-1 34 At4g33290 829465 F-box family protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P C.G. S.X.
0.03 8e-1 34 At3g19260 821460 LOH2 (LAG ONE HOMOLOGUE 2) LAG1 homolog . Loss of function mutant is sensitive to AAL-toxin. LOH2 is presumed to function in sphingolipid metabolism. C.G. S.X.
0.03 8e-1 34 At2g34010 817962 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PFO C.G. S.X.
0.02 8e-1 34 At2g18780 816393 F-box family protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO C.G. S.X.
0.02 8e-1 34 At1g19710 838559 glycosyl transferase family 1 protein F:transferase activity, transferring glycosyl groups;P:biosynthetic process;C:Golgi apparatus;BOAMPF C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.09 1e+0 34 Glycine max Gma.3586.1.S1_at BE658205 - - 2e-6 At2g01300 unknown protein C.G. S.X.
0.03 2e+0 32 Hordeum vulgare HT12B02u_at HT12B02u - - 1e+0 At5g43680 unknown protein C.G. S.X.
0.03 6e+0 32 Oryza sativa Os03g0400400 9631.m02792 - - 5e-3 At4g04260 bromo-adjacent homology (BAH) domain-containing protein C.G. S.X.
0.09 2e-5 50 Populus trichocarpa Ptp.7166.1.S1_at BU886546 hypothetical protein - 5e-9 At2g01300 unknown protein C.G. S.X.
0.04 9e-1 34 Triticum aestivum TaAffx.59244.2.S1_at CA625584 - - 5e-12 At1g19580 GAMMA CA1 (GAMMA CARBONIC ANHYDRASE 1) C.G. S.X.
0.05 4e-3 40 Vitis vinifera 1608050_at CF405502 hypothetical protein LOC100242324 - 9e-5 At2g01300 unknown protein C.G. S.X.
0.04 9e-2 36 Zea mays Zm.4659.2.A1_at CF014131 - - 3e-1 At1g15010 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
X GO:0050832 Reactions triggered in response to the presence of a fungus that act to protect the cell or organism.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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