Gene omics information

Query gene ID At1g14870
Gene name -
Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.146.8At1g14870838052-F:molecular_function unknown;P:response to oxidative stress;C:plasma membrane;PMFOS.X.H.G.
0.8391.4At2g14610815949PR1 (PATHOGENESIS-RELATED GENE 1)PR1 gene expression is induced in response to a variety of pathogens. It is a useful molecular marker for the SAR response. Though the Genbank record for the cDNA associated to this gene is called 'PR-1-like', the sequence actually corresponds to PR1. Expression of this gene is salicylic-acid responsive.S.X.H.G.
0.6781.6At1g75040843842PR5 (PATHOGENESIS-RELATED GENE 5)Thaumatin-like protein involved in response to pathogens. mRNA level of the PR-5 gene (At1g75040)is significantly changed after cutting the inflorescence stem indicating the existence of a network of signal transducing pathways as other stress-regulated genes (At5g01410, At3g17800, At1g29930)do not response to the treatment.S.X.H.G.
0.5974.7At3g57260824893BGL2 (BETA-1,3-GLUCANASE 2)beta 1,3-glucanaseS.X.H.G.
0.5673.0At5g10760830943aspartyl protease family proteinF:aspartic-type endopeptidase activity;P:proteolysis;C:apoplast;PMFOS.X.H.G.
0.5368.6At2g43570818959chitinase, putativeF:chitin binding, chitinase activity;P:cell wall macromolecule catabolic process;C:apoplast, plant-type cell wall;PBFOMVS.X.H.G.
0.5368.6At5g55450835638protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinF:lipid binding;P:response to other organism, lipid transport;C:endomembrane system;PS.X.H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
15.499.5GSM184555Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis root
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Homologous genes

Paralogous genes

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HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.896e-153539At5g35525833517unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMFOC.G.S.X.
0.901e-141502At1g14880838053unknown proteinF:molecular_function unknown;P:biological_process unknown;C:vacuole;PMFOC.G.S.X.
0.072e-136At1g68610843191unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMFOC.G.S.X.
0.009e-134At1g50030841427TOR (TARGET OF RAPAMYCIN)Related to TOR proteins from yeast and mammals, regulators of cell growth in response to nutrient availability. TOR proteins belong to the family of phosphatidylinositol 3-kinase and are targets of the antiproliferative drug rapamycin. AtTOR binds the yeast FKBP12 protein in the presence of Rapamycin, is involved in embryogenesis and is expressed in embryos, endosperm and meristems.C.G.S.X.
0.054e+032At5g165676240540unknown proteinF:unknown;P:unknown;C:unknownC.G.S.X.
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Orthologous genes

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HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.073e-136Glycine maxGma.5793.5.S1_atCD414114--5e-1At1g14870-C.G.S.X.
0.032e+032Hordeum vulgareEBro08_SQ009_L23_atEBro08_SQ009_L23--1e+0At1g03650GCN5-related N-acetyltransferase (GNAT) family proteinC.G.S.X.
0.031e-448Oryza sativaOs04g0286400AK062974.1-Hypothetical protein2e-4At1g14870-C.G.S.X.
0.048e-238Populus trichocarpaPtp.3169.2.S1_a_atCK104417hypothetical protein-9e-2At1g14870-C.G.S.X.
0.041e+130Triticum aestivumTaAffx.7413.1.S1_atCA659512--5e-1At5g57750zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.044e+030Vitis vinifera1621014_atCF212114hypothetical protein LOC100258834-2e+0At3g06760-C.G.S.X.
0.046e+030Zea maysZmAffx.720.1.S1_atAI739909--2e-1At1g11572-C.G.S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
XGO:0006979A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

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