Gene omics information

Query gene ID At1g14530
Gene name THH1 (TOM THREE HOMOLOG 1)
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.5673.0At1g14530838015THH1 (TOM THREE HOMOLOG 1)F:virion binding;P:biological_process unknown;C:cellular_component unknown;POS.X.H.G.
0.4457.2At3g50910824255unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POMBS.X.H.G.
0.3948.4At1g15920838162CCR4-NOT transcription complex protein, putativeF:ribonuclease activity, nucleic acid binding;P:RNA modification;C:nucleus;PMOFS.X.H.G.
0.3745.0At1g53320841766AtTLP7 (TUBBY LIKE PROTEIN 7)Member of TLP familyS.X.H.G.
0.3338.1At3g22290821798unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOFPS.X.H.G.
0.3235.7At3g55050824671serine/threonine protein phosphatase 2C (PP2C6)F:protein serine/threonine phosphatase activity, catalytic activity;P:protein amino acid dephosphorylation;C:protein serine/threonine phosphatase complex;PMOFBS.X.H.G.
0.3133.8At2g17370816244HMG2 (3-HYDROXY-3-METHYLGLUTARYL-COA REDUCTASE 2)Encodes a 3-hydroxy-3-methylglutaryl-CoA reductase (HMGR) that is involved in the synthesis of sterol and triterpenoid compounds.S.X.H.G.
0.3133.8At1g36050840509unknown proteinF:molecular_function unknown;P:fatty acid biosynthetic process;C:plasma membrane;MOFPS.X.H.G.
0.3133.8At5g10650830929zinc finger (C3HC4-type RING finger) family proteinF:protein binding, zinc ion binding;P:unknown;C:unknown;OMPFBVS.X.H.G.
0.2930.3At1g14560838018mitochondrial substrate carrier family proteinF:transporter activity, binding;P:transport, mitochondrial transport;C:endomembrane system, mitochondrial inner membrane, membrane;MFPOS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
332.0100.0GSM133303RIKEN-NAKABAYASHI1AGSE5700AtGenExpress: Effect of ABA during seed imbibition
312.7100.0GSM133304RIKEN-NAKABAYASHI1BGSE5700AtGenExpress: Effect of ABA during seed imbibition
158.599.9E-MEXP-1443-raw-cel-1581869573
111.499.9GSM133117RIKEN-YAMAUCHI1AGSE5687AtGenExpress: Different temperature treatment of seeds
72.799.9GSM184904Arabidopsis, root cells, protophloem, standard conditions, replicate 1GSE7641Expression analysis of root cell-types after treatment with salt
47.099.8GSM184906Arabidopsis, root cells, protophloem, standard conditions, replicate 3GSE7641Expression analysis of root cell-types after treatment with salt
45.299.8GSM142736DH001_ATH1_A3-TCP1GSE6162Transcriptome analysis of Arabidopsis microgametogenesis
44.699.8GSM184923Arabidopsis, root cells, protophloem, 140 mM NaCl, replicate 2GSE7641Expression analysis of root cell-types after treatment with salt
34.799.7GSM311291Laser capture microdissected (LCM) chalazal endosperm at the linear-cotyledon stage, biological replicate 1GSE12403Expression data from Arabidopsis seed compartments at the linear-cotyledon stage
32.199.7GSM131706ATGE_84_AGSE5634AtGenExpress: Developmental series (siliques and seeds)
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.790817At2g02180814749TOM3Necessary for the efficient multiplication of tobamoviruses.C.G.S.X.
0.021e-138At1g12740837830CYP87A2encodes a protein with cytochrome P450 domainC.G.S.X.
0.022e+034At4g39140830069protein binding / zinc ion bindingF:protein binding, zinc ion binding;P:N-terminal protein myristoylation;C:unknown;OPMFBC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.267e-44178Glycine maxGma.5009.1.S1_a_atAW831559--5e-44At1g14530THH1 (TOM THREE HOMOLOG 1)C.G.S.X.
0.305e-30131Hordeum vulgareContig9638_atContig9638--2e-29At1g14530THH1 (TOM THREE HOMOLOG 1)C.G.S.X.
0.236e-1479Oryza sativaOs03g0120300AK066854.1-THH15e-14At1g14530THH1 (TOM THREE HOMOLOG 1)C.G.S.X.
0.372e-31137Populus trichocarpaPtp.5721.1.S1_atCF232569hypothetical protein-1e-26At2g02180TOM3C.G.S.X.
0.206e-1995Triticum aestivumTaAffx.115796.1.S1_atCA651978--8e-12At2g02180TOM3C.G.S.X.
0.371e-54212Vitis vinifera1608406_atBQ798813hypothetical protein LOC100266794-2e-52At2g02180TOM3C.G.S.X.
0.412e-25115Zea maysZm.5771.1.A1_atBM336016tobamovirus multiplication 3-5e-25At1g14530THH1 (TOM THREE HOMOLOG 1)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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