Gene omics information

Query gene ID At1g14370
Gene name APK2A (PROTEIN KINASE 2A)
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.2930.3At1g14370837999APK2A (PROTEIN KINASE 2A)Encodes protein kinase APK2a.S.X.H.G.
0.5570.6At5g47910834842RBOHD (RESPIRATORY BURST OXIDASE HOMOLOGUE D)NADPH/respiratory burst oxidase protein D (RbohD).Interacts with AtrbohF gene to fine tune the spatial control of ROI production and hypersensitive response to cell in and around infection site.S.X.H.G.
0.5065.3At1g11050837646protein kinase family proteinF:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVAS.X.H.G.
0.4355.3At1g07135837224glycine-rich proteinF:molecular_function unknown;P:biological_process unknown;C:anchored to membrane;BMPOFVAS.X.H.G.
0.4253.9At3g16720820924ATL2RING-H2 protein induced after exposure to chitin or inactivated crude cellulase preparations.S.X.H.G.
0.4152.4At2g05940815147protein kinase, putativeF:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cellular_component unknown;MPOBFVAS.X.H.G.
0.2726.2At4g34390829589XLG2 (extra-large GTP-binding protein 2)F:guanyl nucleotide binding, signal transducer activity;P:in 7 processes;C:nucleus;MFPOBS.X.H.G.
0.2319.3At1g28380839735NSL1 (necrotic spotted lesions 1)This gene is predicted to encode a protein involved in negatively regulating salicylic acid-related defense responses and cell death programs. nsl1 mutants develop necrotic lesions spontaneously and show other features of a defense response, such as higher levels of SA and disease resistance-related transcripts, in the absence of a biotic stimulus. The NSL1 protein is predicted to have a MACPF domain, found in proteins that form a transmembrane pore in mammalian immune responses. NSL1 transcript levels do not appear to change in response to biotic stresses, but are elevated by cycloheximide in seedlings, and by sodium chloride in roots.S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
50.399.8E-MEXP-807-raw-cel-1173272948
37.599.7GSM142649MC002_ATH1_A9.3-dubos-aahGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
33.699.7GSM142647MC002_ATH1_A9.1-dubos-aahGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
33.499.7GSM142646MC002_ATH1_A8.3-dubos-aihGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
30.299.7GSM13779Dexamethasone plus cycloheximideGSE911Identification of LEAFY targets during reproductive transition
29.499.7GSM184556Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis root
27.299.7GSM142645MC002_ATH1_A8.2-dubos-aihGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
25.999.7GSM39211RRE2_Chitin1GSE2169rre1 and rre2 mutants
25.099.6GSM13783Dexamethasone plus cycloheximide - replicateGSE911Identification of LEAFY targets during reproductive transition
24.899.6GSM142648MC002_ATH1_A9.2-dubos-aahGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.752e-152539At2g02800814810APK2B (PROTEIN KINASE 2B)Encodes protein kinase APK2b.C.G.S.X.
0.271e-1481At1g26970839588protein kinase, putativeF:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation, N-terminal protein myristoylation;C:chloroplast;MPOBFVAC.G.S.X.
0.117e-756At1g07570837271APK1AProtein kinase capable of phosphorylating tyrosine, serine, and threonine residuesC.G.S.X.
0.022e-448At5g02070831776protein kinase-relatedF:kinase activity;P:protein amino acid phosphorylation;C:unknown;MPOBFVAC.G.S.X.
0.012e-448At1g72180843550leucine-rich repeat transmembrane protein kinase, putativeF:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:cellular_component unknown;MPOBFVAC.G.S.X.
0.027e-446At4g29990829122light repressible receptor protein kinaseF:protein binding, protein serine/threonine kinase activity, protein kinase activity, ATP binding;P:protein amino acid phosphorylation;C:endomembrane system;PMOBFVAC.G.S.X.
0.087e-446At1g69790843315protein kinase, putativeF:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:chloroplast;MPOBFVAC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.207e-1479Glycine maxGma.8195.2.S1_a_atBG510290--3e-21At2g02800APK2B (PROTEIN KINASE 2B)C.G.S.X.
0.118e-857Hordeum vulgareContig8990_atContig8990--3e-10At2g02800APK2B (PROTEIN KINASE 2B)C.G.S.X.
0.141e-965Oryza sativaOs10g0405100AK100413.1-Protein kinase APK1B (EC 2.7.1.-)2e-9At2g02800APK2B (PROTEIN KINASE 2B)C.G.S.X.
0.234e-1583Populus trichocarpaPtpAffx.42389.1.A1_a_atCV270177hypothetical protein-3e-16At2g02800APK2B (PROTEIN KINASE 2B)C.G.S.X.
0.127e-1065Triticum aestivumTa.5275.1.A1_atAJ615682--9e-26At2g28930APK1BC.G.S.X.
0.042e-136Vitis vinifera1618958_atAY427138.1--3e-1At4g00680ADF8 (ACTIN DEPOLYMERIZING FACTOR 8)C.G.S.X.
0.102e-1789Zea maysZm.4140.1.S1_atBE552528hypothetical protein LOC100191980-2e-17At1g69790protein kinase, putativeC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
LGO:0006468The process of introducing a phosphate group on to a protein.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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