Gene omics information

Query gene ID At1g14220
Gene name ribonuclease T2 family protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.4659.8At1g14220837983ribonuclease T2 family proteinF:ribonuclease T2 activity, endoribonuclease activity, RNA binding;P:N-terminal protein myristoylation;C:endomembrane system;PBFMOVS.X.H.G.
0.8491.9At5g04970830379pectinesterase, putativeF:enzyme inhibitor activity, pectinesterase activity;P:cell wall modification;C:cell wall;MOPBFVAS.X.H.G.
0.7888.6At3g05390819703unknown proteinF:molecular_function unknown;P:biological_process unknown;C:mitochondrion;PABOS.X.H.G.
0.7687.4At1g52050841634jacalin lectin family proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PMOS.X.H.G.
0.7184.2At2g23630816895sks16 (SKU5 Similar 16)F:pectinesterase activity, copper ion binding;P:unknown;C:endomembrane system;FBPMOAS.X.H.G.
0.7083.5At1g47620841171CYP96A8member of CYP96AS.X.H.G.
0.7083.5At3g06460819823GNS1/SUR4 membrane family proteinF:molecular_function unknown;P:biological_process unknown;C:integral to membrane;MFOPVS.X.H.G.
0.6882.2At2g17070816212unknown proteinF:molecular_function unknown;P:unknown;C:unknown;PMOBFS.X.H.G.
0.6781.6At3g47400823894pectinesterase family proteinF:enzyme inhibitor activity, pectinesterase activity;P:cell wall modification;C:endomembrane system, cell wall, plant-type cell wall;PBOFVMAS.X.H.G.
0.6579.6At1g06090837118fatty acid desaturase family proteinF:oxidoreductase activity;P:lipid metabolic process;C:cellular_component unknown;BOMFPVS.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
347.1100.0GSM184477Lateral Root Cap root cells 2hr KCl control treated, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis root
295.9100.0GSM266665Arabidopsis, root cells, epidermis and lateral root cap, -Fe, replicate 4GSE10501Expression analysis of root cell-types after iron deficiency (-Fe) treatment
217.0100.0GSM266662Arabidopsis, root cells, epidermis and lateral root cap, -Fe, replicate 1GSE10501Expression analysis of root cell-types after iron deficiency (-Fe) treatment
186.7100.0GSM218590Protoplasted root cells 2hr transitory KNO3 treated, biological rep3GSE7631Cell-specific nitrogen responses in the Arabidopsis root
151.599.9GSM184478Lateral Root Cap root cells 2hr KCl control treated, biological rep3GSE7631Cell-specific nitrogen responses in the Arabidopsis root
133.299.9GSM266664Arabidopsis, root cells, epidermis and lateral root cap, -Fe, replicate 3GSE10501Expression analysis of root cell-types after iron deficiency (-Fe) treatment
120.899.9GSM184909Arabidopsis, root cells, epidermis and lateral root cap, 140 mM NaCl, replicate 3GSE7641Expression analysis of root cell-types after treatment with salt
117.699.9GSM184480Lateral Root Cap root cells 2hr transitory KNO3 treated, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis root
110.199.9GSM184891Arabidopsis, root cells, epidermis and lateral root cap, standard conditions, replicate 3GSE7641Expression analysis of root cell-types after treatment with salt
86.399.9GSM184483Lateral Root Cap root cells 2hr continuous KNO3 treated, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis root
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.282e-1893At1g26820839225RNS3 (RIBONUCLEASE 3)Encodes ribonuclease RNS3.C.G.S.X.
0.161e-654At2g02990814828RNS1 (RIBONUCLEASE 1)member of the ribonuclease T2 family, responds to inorganic phosphate starvation, and inhibits production of anthocyanin. Also involved in wound-induced signaling independent of jasmonic acid.C.G.S.X.
0.049e-238At3g51010824265unknown proteinF:molecular_function unknown;P:biological_process unknown;C:mitochondrion, plastid;PC.G.S.X.
0.013e-136At1g21670838769-F:unknown;P:proteolysis;C:cell wall, plant-type cell wall;BOPAFMC.G.S.X.
0.021e+034At5g29624833061DC1 domain-containing proteinF:zinc ion binding;P:intracellular signaling cascade;C:intracellular;PMOFC.G.S.X.
0.021e+034At4g17695827490KAN3 (KANADI 3)F:transcription factor activity, DNA binding;P:regulation of transcription;C:unknown;POC.G.S.X.
0.011e+034At3g05900819759neurofilament protein-relatedF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOBFPAVC.G.S.X.
0.011e+034At2g11000815566ATMAK10Encodes a non-functional Arabidopsis homolog of the yeast protein MAK10, a component of the N-terminal acetyltransferase complex C. Mutant plants have normal photosynthesis as well as growth rates and pigmentation comparable to wild type.C.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.185e-756Glycine maxGmaAffx.17634.1.S1_atBF325375--3e-19At2g02990RNS1 (RIBONUCLEASE 1)C.G.S.X.
0.033e+032Hordeum vulgareHVSMEc0016D02f_atHVSMEc0016D02f--2e-83Atcg00350-C.G.S.X.
0.027e-136Oryza sativaOs03g0829100AK072669.1-Soluble epoxide hydrolase6e-4At2g26740ATSEH (Arabidopsis thaliana soluble epoxide hydrolase)C.G.S.X.
0.131e-448Populus trichocarpaPtpAffx.162370.1.S1_atCX659276hypothetical protein-1e-16At2g02990RNS1 (RIBONUCLEASE 1)C.G.S.X.
0.041e+034Triticum aestivumTa.21060.1.S1_atCA648262--9e+0At5g07770formin homology 2 domain-containing protein / FH2 domain-containing proteinC.G.S.X.
0.036e+030Vitis vinifera1620436_a_atCB910355hypothetical protein LOC100261866-1e+1At5g59080unknown proteinC.G.S.X.
0.049e+030Zea maysZmAffx.1122.1.S1_atAW288748--4e+0At1g14220ribonuclease T2 family proteinC.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage