Gene omics information

Query gene ID At1g14120
Gene name 2-oxoglutarate-dependent dioxygenase, putative
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.4457.2At1g141208379712-oxoglutarate-dependent dioxygenase, putativeF:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity;P:biological_process unknown;C:cellular_component unknown;POBFMS.X.H.G.
0.7184.2At5g38030833782MATE efflux family proteinF:antiporter activity, drug transporter activity, transporter activity;P:response to nematode;C:membrane;BOPFAMS.X.H.G.
0.6781.6At5g37990833778S-adenosylmethionine-dependent methyltransferase/ methyltransferaseF:S-adenosylmethionine-dependent methyltransferase activity, methyltransferase activity;P:biological_process unknown;C:endomembrane system;POBMFS.X.H.G.
0.5773.8At5g38020833781S-adenosyl-L-methionine:carboxyl methyltransferase family proteinencodes a protein whose sequence is similar to SAM:salicylic acid carboxyl methyltransferase (SAMT) (GI:6002712)(Clarkia breweri) and to SAM:benzoic acid carboxyl methyltransferase (BAMT)(GI:9789277)(Antirrhinum majus)S.X.H.G.
0.4253.9At5g48010834852THAS1 (THALIANOL SYNTHASE 1)Encodes an oxidosqualene cyclase involved in the biosynthesis of thalianol, a tricyclic triterpenoid of unknown function. Overexpression of THAS leads to dwarfing in the aerial tissues of Arabidopsis plants, but increases their root length. THAS is part of a small operon-like cluster of genes (with At5g48000 (THAH) and At5g47990 (THAD)) involved in thalianol metabolism.S.X.H.G.
0.4050.8At5g48000834851CYP708A2Encodes a member of the CYP708A family of cytochrome P450 enzymes. THAH appears to add a hydroxyl group to the triterpene thalianol. thah1 mutants have an elevated accumulation of thalianol. thah1-1 mutants have longer roots than wild type plants. Thalian-diol and desaturated thalian-diol are lost from the root extracts of thah1-1 mutants. Overexpression of the sequence from At5g48000.1 rescues the thah1-1 mutant phenotype (Field 2008); it is unknown whether the shorter sequences associated with other gene models would provide functional complementation.S.X.H.G.
0.3133.8At4g11310826733cysteine proteinase, putativecysteine proteinase precursor-like proteinS.X.H.G.
0.2624.4At3g46700823823UDP-glycosyltransferase/ transferase, transferring glycosyl groupsF:UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups;P:metabolic process;C:unknown;PMBVOFS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
120.299.9GSM271060Arabidopsis plant (Col-0), 4h_response to OPDA_rep3GSE10732Identification of TGA-regulated genes in response to phytoprostane A1 and OPDA
83.199.9GSM271059Arabidopsis plant (Col-0), 4h_response to OPDA_rep2GSE10732Identification of TGA-regulated genes in response to phytoprostane A1 and OPDA
82.199.9GSM131574ATGE_99_BGSE5631AtGenExpress: Developmental series (roots)
71.599.9GSM142669SF002_ATH1_A7-Fille-ANGR4-12nodexGSE6155Nutritional control of plant development: molecular analysis of the NO3- response pathway in Arabidopsis roots.
70.899.9GSM271058Arabidopsis plant (Col-0), 4h_response to OPDA_rep1GSE10732Identification of TGA-regulated genes in response to phytoprostane A1 and OPDA
70.299.9GSM131573ATGE_99_AGSE5631AtGenExpress: Developmental series (roots)
67.699.9GSM131575ATGE_99_CGSE5631AtGenExpress: Developmental series (roots)
59.999.8GSM142670SF002_ATH1_A8-Fille-ANGR4-12+dexGSE6155Nutritional control of plant development: molecular analysis of the NO3- response pathway in Arabidopsis roots.
57.899.8GSM271082Arabidopsis plant (tga2-5-6), 4h_response to OPDA_rep3GSE10732Identification of TGA-regulated genes in response to phytoprostane A1 and OPDA
55.199.8GSM142675SF002_ATH1_A6-Fille-WT+dexGSE6155Nutritional control of plant development: molecular analysis of the NO3- response pathway in Arabidopsis roots.
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.732e-173609At1g141308379722-oxoglutarate-dependent dioxygenase, putativeF:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity;P:biological_process unknown;C:nucleus;POBFMC.G.S.X.
0.038e-342At1g02400839508GA2OX6 (GIBBERELLIN 2-OXIDASE 6)Encodes a gibberellin 2-oxidase.C.G.S.X.
0.021e-138At3g0484081964440S ribosomal protein S3A (RPS3aA)F:structural constituent of ribosome;P:translation;C:cytosolic small ribosomal subunit, cytosolic ribosome, plasma membrane, chloroplast;MOAPFBC.G.S.X.
0.011e-138At2g22660816797-F:molecular_function unknown;P:biological_process unknown;C:plasma membrane;FPBOMC.G.S.X.
0.012e+034Atcg00170--RNA polymerase beta' subunit-2C.G.S.X.
0.022e+034At5g58250835937unknown proteinF:molecular_function unknown;P:biological_process unknown;C:thylakoid, chloroplast;OBPC.G.S.X.
0.012e+034At3g01610821105CDC48CAAA-type ATPase - Over 90% homologous to CDC48aC.G.S.X.
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Orthologous genes



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HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.034e-240Glycine maxGmaAffx.12248.1.S1_atBF596704--1e-12At1g141302-oxoglutarate-dependent dioxygenase, putativeC.G.S.X.
0.024e+032Hordeum vulgareX68656_s_atX68656--5e+0At1g141202-oxoglutarate-dependent dioxygenase, putativeC.G.S.X.
0.036e-240Oryza sativaOs09g0375600AK062323.1-Protein kinase domain containing protein4e-5At1g24030protein kinase family proteinC.G.S.X.
0.064e-240Populus trichocarpaPtpAffx.201431.1.S1_s_atpmrna28262-oxoglutarate-dependent dioxygenase-2e-6At1g141302-oxoglutarate-dependent dioxygenase, putativeC.G.S.X.
0.033e-240Triticum aestivumTaAffx.49749.1.S1_atCA639769--1e-12At1g79620leucine-rich repeat transmembrane protein kinase, putativeC.G.S.X.
0.032e+032Vitis vinifera1616423_atBM437002--3e-2At1g02400GA2OX6 (GIBBERELLIN 2-OXIDASE 6)C.G.S.X.
0.033e+032Zea maysZm.11725.1.A1_atBM380225--3e+0At4g05430-C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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