CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At1g14080

Gene name FUT6 (FUCOSYLTRANSFERASE 6)

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
0.28 30.3 At1g14080 837968 FUT6 (FUCOSYLTRANSFERASE 6) member of Xyloglucan fucosyltransferase family S.X. H.G.
0.80 89.8 At1g10810 837624 aldo/keto reductase family protein F:oxidoreductase activity, aldo-keto reductase activity;P:oxidation reduction;C:cellular_component unknown;BOFMPA S.X. H.G.
0.40 50.8 At1g50720 841494 stigma-specific Stig1 family protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;BPOFM S.X. H.G.
0.38 46.7 At1g33280 840223 ANAC015 (Arabidopsis NAC domain containing protein 15) F:transcription factor activity;P:multicellular organismal development, regulation of transcription;C:cellular_component unknown;P S.X. H.G.
0.38 46.7 At5g57500 835854 transferase, transferring glycosyl groups F:transferase activity, transferring glycosyl groups;P:protein amino acid glycosylation;C:endomembrane system, membrane;PMOF S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
286.2 100.0 GSM266667 Arabidopsis, root cells, columella root cap, -Fe, replicate 2 GSE10501 Expression analysis of root cell-types after iron deficiency (-Fe) treatment
271.1 100.0 GSM184894 Arabidopsis, root cells, columella root cap, standard conditions, replicate 3 GSE7641 Expression analysis of root cell-types after treatment with salt
191.4 100.0 GSM266666 Arabidopsis, root cells, columella root cap, -Fe, replicate 1 GSE10501 Expression analysis of root cell-types after iron deficiency (-Fe) treatment
179.2 100.0 GSM266668 Arabidopsis, root cells, columella root cap, -Fe, replicate 3 GSE10501 Expression analysis of root cell-types after iron deficiency (-Fe) treatment
166.5 100.0 GSM184892 Arabidopsis, root cells, columella root cap, standard conditions, replicate 1 GSE7641 Expression analysis of root cell-types after treatment with salt
163.7 99.9 GSM184831 Arabidopsis, root, longitudinal zone 1, standard conditions, replicate 1 GSE7639 Expression analysis of root developmental zones after treatment with salt
125.5 99.9 GSM184477 Lateral Root Cap root cells 2hr KCl control treated, biological rep2 GSE7631 Cell-specific nitrogen responses in the Arabidopsis root
121.8 99.9 GSM184484 Lateral Root Cap root cells 2hr continuous KNO3 treated, biological rep3 GSE7631 Cell-specific nitrogen responses in the Arabidopsis root
105.6 99.9 GSM266665 Arabidopsis, root cells, epidermis and lateral root cap, -Fe, replicate 4 GSE10501 Expression analysis of root cell-types after iron deficiency (-Fe) treatment
96.7 99.9 GSM226531 L1SB GSE8934 A high resolution organ expression map reveals novel expression patterns and predicts cellular function
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.69 0 654 At1g14070 837967 FUT7 member of Xyloglucan fucosyltransferase family C.G. S.X.
0.71 0 648 At2g15390 816031 FUT4 Predicted fucosyltransferase, based on similarity to FUT1, but not functionally redundant with FUT1. C.G. S.X.
0.53 3e-96 353 At1g14100 5007694 FUT8 (FUCOSYLTRANSFERASE 8) member of Glycosyltransferase Family- 37. FUT8 was previously associated to AT1G14110 C.G. S.X.
0.63 4e-89 329 At2g15370 816029 FUT5 Predicted fucosyltransferase, based on similarity to FUT1, but not functionally redundant with FUT1. C.G. S.X.
0.68 3e-71 270 At2g15350 816027 FUT10 (FUCOSYLTRANSFERASE 10) member of Glycosyltransferase Family- 37 C.G. S.X.
0.18 4e-12 73 At2g03220 814851 FT1 (FUCOSYLTRANSFERASE 1) member of Glycosyltransferase Family- 37 C.G. S.X.
0.07 5e-5 50 At2g15360 816028 galactoside 2-alpha-L-fucosyltransferase F:galactoside 2-alpha-L-fucosyltransferase activity;P:cell wall biogenesis;C:membrane;P C.G. S.X.
0.02 3e-3 44 At2g03210 814850 FUT2 (FUCOSYLTRANSFERASE 2) member of Glycosyltransferase Family- 37 C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.05 8e-11 69 Glycine max GmaAffx.11206.1.A1_at CD412213 - - 8e-7 At2g15390 FUT4 C.G. S.X.
0.02 2e+0 34 Hordeum vulgare HS07D13u_x_at HS07D13u - - 1e+0 At3g02140 TMAC2 (TWO OR MORE ABRES-CONTAINING GENE 2) C.G. S.X.
0.03 1e-1 40 Oryza sativa Os04g0449200 AK073690.1 - Xyloglucan fucosyltransferase family protein 7e-2 At1g14080 FUT6 (FUCOSYLTRANSFERASE 6) C.G. S.X.
0.05 5e-6 54 Populus trichocarpa PtpAffx.95958.1.A1_at CV226293 glycosyltransferase family-37 - 6e-9 At2g03210 FUT2 (FUCOSYLTRANSFERASE 2) C.G. S.X.
0.02 3e+0 34 Triticum aestivum TaAffx.38356.1.S1_at BJ236316 - - 3e-1 At1g76100 PETE1 (PLASTOCYANIN 1) C.G. S.X.
0.01 4e+0 32 Vitis vinifera 1611558_at CB345264 - - 1e-74 Atcg00660 - C.G. S.X.
0.02 5e+0 32 Zea mays Zm.8161.1.S1_at CB816742 - - 1e+0 At3g48040 ROP10 (RHO-RELATED PROTEIN FROM PLANTS 10) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
L GO:0042546 The process by which a cell wall is synthesized, aggregates, and bonds together. A cell wall is the rigid or semi-rigid envelope lying outside the cell membrane of plant, fungal and most prokaryotic cells, maintaining their shape and protecting them from osmotic lysis.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name
00359 Glucosyltransferase
00437 Xyloglucan biosynthesis and modification
00441 Rhamnogalacturonan II biosynthesis

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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