Gene omics information

Query gene ID At1g14000
Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.4457.2At1g14000837960VIK (VH1-INTERACTING KINASE)Encodes a protein with similarity to members of the C1 subgroup of MAP kinase kinase kinases. Interacts physically with the receptor kinase BRL2/VH1 and appears to be involved in auxin and brassinosteriod signaling.S.X.H.G.
0.3846.7At1g04960839346-F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PBOS.X.H.G.
0.3338.1At1g21080838704DNAJ heat shock N-terminal domain-containing proteinF:unfolded protein binding, heat shock protein binding;P:protein folding;C:cellular_component unknown;BOMFPAVS.X.H.G.
0.3133.8At1g21380838737VHS domain-containing protein / GAT domain-containing proteinF:protein transporter activity;P:intracellular protein transport, intra-Golgi vesicle-mediated transport;C:Golgi stack, intracellular;MFPOBS.X.H.G.
0.2014.4At1g01550839536BPS1 (BYPASS 1)BYPASS1, required to prevent constitutive production of a root-derived graft-transmissible signalS.X.H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
18.199.5GSM204069protoplast_hypoxia_rep1GSE8248Identification of hypoxia-inducible genes in Arabidopsis mesophyll cells
12.599.3GSM205159protoplast_KIN10_rep1GSE8257Identification of KIN10-target genes in Arabidopsis mesophyll cells
12.099.3GSM184904Arabidopsis, root cells, protophloem, standard conditions, replicate 1GSE7641Expression analysis of root cell-types after treatment with salt
11.699.3GSM184906Arabidopsis, root cells, protophloem, standard conditions, replicate 3GSE7641Expression analysis of root cell-types after treatment with salt
11.199.2GSM142837MG001_ATH1_A16-Torres-6N1GSE6176Impact of Type III effectors on plant defense responses
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Homologous genes

Paralogous genes

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HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.021e-242At3g27560822378ATN1encodes a protein with kinase domains, including catalytic domains for serine/threonine as well as tyrosine kinases. a member of multi-gene family and is expressed in all tissues examined.C.G.S.X.
0.024e-240At1g16420838212MC8 (METACASPASE 8)Encodes a metacaspase (cysteine-type endopeptidase) that is involved in promoting programmed cell death in response to hydrogen peroxide (H2O2), UV light, and methyl viologen (MV). Transcript levels rise in response to UV-C, H2O2, and MV. In vitro assays demonstrate that this enzyme has a preference for cleaving after an arginine residue, and it has a pH optimum of 8.0.C.G.S.X.
0.012e-138At4g25160828619protein kinase family proteinF:ubiquitin-protein ligase activity, protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation, protein ubiquitination, response to stress;C:ubiquitin ligase complex;MPOBFVAC.G.S.X.
0.012e-138At4g36940829848NAPRT1 (NICOTINATE PHOSPHORIBOSYLTRANSFERASE 1)F:nicotinate phosphoribosyltransferase activity;P:pyridine nucleotide biosynthetic process, nicotinate nucleotide salvage;C:cellular_component unknown;BMOAPFC.G.S.X.
0.012e-138At2g44580819066protein binding / zinc ion bindingF:protein binding, zinc ion binding;P:unknown;C:unknown;MFPOC.G.S.X.
0.022e-138At1g20130838602hydrolase, acting on ester bonds / lipase/ structural constituent of cell wallF:structural constituent of cell wall, lipase activity, hydrolase activity, acting on ester bonds;P:lipid metabolic process;C:unknown;MBOFPVAC.G.S.X.
0.017e-136At5g35960833587protein kinase, putativeF:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cellular_component unknown;MPOBFVAC.G.S.X.
0.017e-136At5g03150831919JKD (JACKDAW)JKD is a nuclear-localized putative transcription factor with three zinc finger domains. jkd mutants show a number of root patterning defects including ectopic periclinal divisions in the cortex, increased cell numbers in the cortical and epidermal layers, a disrupted QC marker expression pattern, and disorganized QC and columella cells. jkd mutants also have a reduced number of meristematic cells in their roots. JKD can interact with the SCR and SHR proteins implicated in root patterning, as well as another zinc finger transcription factor, MAGPIE. All of these interactions require the first zinc finger in JKD according to a Y2H assay. There are also transcriptional interactions among these proteins. The initiation of JKD transcription does not appear to depend on SCR and SHR, but later expression in the post-embryonic QC cells and ground tissue initials is reduced in scr and shr mutants. JKD also appears to be required for SCR transcription beginning in the embryo. There is also some evidence that JKD plays a role in promoting the movement of SHR into the nucleus, particularly in QC cells, but this may be indirect.C.G.S.X.
0.017e-136At2g25010817040unknown proteinF:molecular_function unknown;P:unknown;C:unknown;PC.G.S.X.
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Orthologous genes

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HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.401e-76287Glycine maxGma.11000.1.S1_atBI967607--1e-76At1g14000VIK (VH1-INTERACTING KINASE)C.G.S.X.
0.272e-33143Hordeum vulgareContig14702_atContig14702--3e-33At1g14000VIK (VH1-INTERACTING KINASE)C.G.S.X.
0.402e-48194Oryza sativaOs07g0632800NM_193100.1-Protein kinase domain containing protein1e-48At1g14000VIK (VH1-INTERACTING KINASE)C.G.S.X.
0.402e-57224Populus trichocarpaPtp.6290.1.S1_atCA925968hypothetical protein-8e-58At1g14000VIK (VH1-INTERACTING KINASE)C.G.S.X.
0.291e-26121Triticum aestivumTa.30049.1.S1_atCA743705--1e-26At1g14000VIK (VH1-INTERACTING KINASE)C.G.S.X.
0.072e-1995Vitis vinifera1614009_atBQ797920hypothetical protein LOC100242045-4e-19At1g14000VIK (VH1-INTERACTING KINASE)C.G.S.X.
0.116e-21101Zea maysZm.3673.1.A1_atAW037200--6e-21At1g14000VIK (VH1-INTERACTING KINASE)C.G.S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
XGO:0009734The series of molecular signals generated in response to detection of auxin.
XGO:0009742A series of molecular signals mediated by the detection of brassinosteroid.
XGO:0010305Vascular tissue pattern formation as it occurs in the leaf of vascular plants.
CGO:0006468The process of introducing a phosphate group on to a protein.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

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