Gene omics information

Query gene ID At1g13030
Gene name sphere organelles protein-related
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.3235.7At1g13030837860sphere organelles protein-relatedF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMFBPVAS.X.H.G.
0.5570.6At2g18330816348AAA-type ATPase family proteinF:nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding;P:unknown;C:unknown;OMBFPAVS.X.H.G.
0.3338.1At1g02970839453WEE1 (ARABIDOPSIS WEE1 KINASE HOMOLOG)Protein kinase that negatively regulates the entry into mitosis.S.X.H.G.
0.3338.1At1g80270844367DNA-binding protein, putativeF:DNA binding;P:biological_process unknown;C:chloroplast envelope;POMFS.X.H.G.
0.1811.4At1g18190838398GC2 (golgin candidate 2)This gene is predicted to encode a protein that functions as a Golgi apparatus structural component known as a golgin in mammals and yeast. A fluorescently-tagged version of GC2 co-localizes with Golgi markers, and this localization appears to be replicated using the C-terminal (508668 aa) portion of the protein.S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
152.199.9GSM133758Lindsey_1-11_heart-stage-root_Rep2_ATH1GSE5730Transcriptional profiling of laser-capture micro-dissected embryonic tissues
79.399.9GSM253645High_Mo_seg_pool_Ler_col_F2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
74.699.9GSM133774Lindsey_1-26_torpedo-meristem_Rep2_ATH1GSE5730Transcriptional profiling of laser-capture micro-dissected embryonic tissues
65.999.8GSM253646Low_Mo_seg_pool_Ler_col_F2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
58.799.8GSM143307Low_Na_seg_pool_tsu_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
52.199.8GSM143309Tsu_genomic_hyb_2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
51.899.8GSM143308Tsu_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
49.599.8GSM133761Lindsey_1-13_torpedo-cotyledon_Rep1_ATH1GSE5730Transcriptional profiling of laser-capture micro-dissected embryonic tissues
47.799.8GSM143306High_Na_seg_pool_tsu_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
40.999.8GSM253650Ler 3GSE10039Low_Mo_Arabidopsis_mapping_MOT1
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.016e-240At5g24460832517unknown proteinF:unknown;P:biological_process unknown;C:cell wall;PFOC.G.S.X.
0.012e-138At5g59350836054unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PC.G.S.X.
0.012e-138At5g51850835260unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOPFBC.G.S.X.
0.012e-138At3g14240820644subtilase family proteinF:identical protein binding, serine-type endopeptidase activity;P:proteolysis, negative regulation of catalytic activity;C:endomembrane system;BPOFAMC.G.S.X.
0.012e-138At2g20120816531COV1 (CONTINUOUS VASCULAR RING)Encodes an integral membrane protein of unknown function, highly conserved between plants and bacteria; is likely to be involved in a mechanism that negatively regulates the differentiation of vascular tissue in the stem. Mutants display a dramatic increase in vascular tissue development in the stem in place of the interfascicular region that normally separates the vascular bundles.C.G.S.X.
0.012e-138At2g20130816532LCV1 (LIKE COV 1)F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OBPAC.G.S.X.
0.012e-138At1g68150843143WRKY9member of WRKY Transcription Factor; Group II-bC.G.S.X.
0.012e-138At1g53730841811SRF6 (STRUBBELIG-RECEPTOR FAMILY 6)F:protein binding, protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:plasma membrane;MPOBFVAC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.039e-550Glycine maxGma.13764.1.A1_atBU545613--3e-5At1g13030sphere organelles protein-relatedC.G.S.X.
0.011e-138Hordeum vulgareContig6946_atContig6946--1e-5At5g01200myb family transcription factorC.G.S.X.
0.023e-242Oryza sativaOs01g0866100AK068991.1--5e-65At5g09810ACT7 (ACTIN 7)C.G.S.X.
0.021e-346Populus trichocarpaPtpAffx.25173.1.A1_a_atCV243954cytochrome P450-7e-9At3g53130LUT1 (LUTEIN DEFICIENT 1)C.G.S.X.
0.024e+034Triticum aestivumTa.7421.2.S1_atBE517472BZip type transcription factor bZIP1-3e-1At1g12830unknown proteinC.G.S.X.
0.034e-342Vitis vinifera1609539_atCF414995hypothetical protein LOC100256103-5e-3At1g13030sphere organelles protein-relatedC.G.S.X.
0.012e+034Zea maysZm.19261.1.A1_atBM332912non-imprinted in Prader-Willi/Angelman syndrome region protein 1-2e-2At4g13800permease-relatedC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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