Gene omics information

Query gene ID At1g12270
Gene name stress-inducible protein, putative
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.5873.8At1g12270837781stress-inducible protein, putativeF:binding;P:response to stress;C:unknown;OMBPFAVS.X.H.G.
0.8190.4At4g10320826624isoleucyl-tRNA synthetase, putative / isoleucine--tRNA ligase, putativeF:isoleucine-tRNA ligase activity, nucleotide binding, aminoacyl-tRNA ligase activity, ATP binding;P:response to cadmium ion, tRNA aminoacylation for protein translation;C:cytosol;OBAMFPS.X.H.G.
0.6781.6At1g19525---S.X.H.G.
0.5974.7At5g26710832718glutamate-tRNA ligase, putative / glutamyl-tRNA synthetase, putatuve / GluRS, putativeF:glutamate-tRNA ligase activity;P:glutamyl-tRNA aminoacylation, translation, tRNA aminoacylation for protein translation;C:cytoplasm;BOMFAPS.X.H.G.
0.5773.8At5g20890832213chaperonin, putativeF:unfolded protein binding, protein binding, ATP binding;P:protein folding, cellular protein metabolic process;C:anchored to plasma membrane, cell wall;BOMFPAS.X.H.G.
0.5570.6At1g72550843587tRNA synthetase beta subunit family proteinF:phenylalanine-tRNA ligase activity, RNA binding, magnesium ion binding, nucleotide binding, ATP binding;P:phenylalanyl-tRNA aminoacylation, translation;C:phenylalanine-tRNA ligase complex, cytoplasm;BOMAFPS.X.H.G.
0.5469.5At5g26830832741threonyl-tRNA synthetase / threonine--tRNA ligase (THRRS)Encodes a dual-targeted threonyl-tRNA synthetase found in both the chloroplast and mitochondrion.S.X.H.G.
0.4761.2At3g49080824070ribosomal protein S9 family proteinF:structural constituent of ribosome;P:translation;C:cytosolic small ribosomal subunit, ribosome, intracellular;BOMAPFVS.X.H.G.
0.3948.4At5g51120835186PABN1 (POLYADENYLATE-BINDING PROTEIN 1)Encodes a homolog of the protein PABN1, a polyadenylation factor subunit.S.X.H.G.
0.3846.7At3g02530821160chaperonin, putativeF:unfolded protein binding, protein binding, ATP binding;P:response to cadmium ion;C:membrane, cytoplasm;BOMFPAS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
32.699.7E-ATMX-13-raw-cel-1556149935
30.299.7GSM311274Laser capture microdissected (LCM) embryo proper at the pre-globular stage, biological replicate 2GSE12402Expression data from Arabidopsis seed compartments at the pre-globular stage
28.499.7GSM311273Laser capture microdissected (LCM) embryo proper at the pre-globular stage, biological replicate 1GSE12402Expression data from Arabidopsis seed compartments at the pre-globular stage
24.799.6E-ATMX-13-raw-cel-1556149855
24.099.6E-ATMX-13-raw-cel-1556149919
23.099.6E-ATMX-13-raw-cel-1556149823
22.899.6E-ATMX-13-raw-cel-1556149839
21.899.6E-ATMX-13-raw-cel-1556149903
21.899.6E-ATMX-13-raw-cel-1556149807
21.299.6E-ATMX-13-raw-cel-1556149871
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.710803At1g62740842572stress-inducible protein, putativeF:binding;P:response to stress;C:cytosol, nucleus, plasma membrane;OBMPFAVC.G.S.X.
0.483e-53210At4g12400826849stress-inducible protein, putativeF:binding;P:response to high light intensity, response to hydrogen peroxide, response to heat, response to stress;C:cellular_component unknown;OBMPFAVC.G.S.X.
0.016e-240At3g24260822014-F:molecular_function unknown;P:biological_process unknown;C:chloroplast;POMABFC.G.S.X.
0.016e-240At1g06910837201TRFL7 (TRF-LIKE 7)Arabidopsis thaliana myb family transcription factor (At1g06910)C.G.S.X.
0.012e-138At3g54570824622calmodulin-binding protein-relatedF:molecular_function unknown;P:biological_process unknown;C:unknown;POBFVMC.G.S.X.
0.022e-138At2g29490817498ATGSTU1 (GLUTATHIONE S-TRANSFERASE TAU 1)Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).C.G.S.X.
0.019e-136At5g47040834750LON2 (LON PROTEASE 2)Encodes a member of the Lon protease-like proteins (Lon1/At5g26860, Lon2/At5g47040, Lon3/At3g05780, Lon4/At3g05790). Lon is a multifunctional ATP-dependent protease which exists in bacteria, archaea and within organelles in eukaryotic cells. Lon proteases are responsible for the degradation of abnormal, damaged and unstable proteins.C.G.S.X.
0.019e-136At4g21060827853galactosyltransferase family proteinF:transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups;P:protein amino acid glycosylation;C:membrane;MPOFBC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.311e-28129Glycine maxGma.8435.1.S1_atX79770.1stress inducible protein-1e-61At1g62740stress-inducible protein, putativeC.G.S.X.
0.311e-22107Hordeum vulgareContig7425_atContig7425--2e-41At1g62740stress-inducible protein, putativeC.G.S.X.
0.145e-1067Oryza sativaOs02g0644100AK102431.1-Heat shock protein STI (Stress inducible protein)(GmSTI)6e-33At1g62740stress-inducible protein, putativeC.G.S.X.
0.445e-37157Populus trichocarpaPtpAffx.215660.1.S1_s_atpmrna29980hypothetical protein-1e-64At4g12400stress-inducible protein, putativeC.G.S.X.
0.134e-963Triticum aestivumTa.8679.1.S1_x_atCK157404--1e-9At1g62740stress-inducible protein, putativeC.G.S.X.
0.407e-51200Vitis vinifera1618545_a_atCB346750hypothetical LOC100265979-2e-50At1g12270stress-inducible protein, putativeC.G.S.X.
0.187e-1271Zea maysZm.2497.1.S1_atAY107480.1hypothetical protein LOC100272917-3e-55At4g12400stress-inducible protein, putativeC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
CGO:0006950A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation).
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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