Gene omics information

Query gene ID At1g11840
Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At1g11840837731ATGLX1 (GLYOXALASE I HOMOLOG)Encodes a glyoxalase I homolog ATGLX1.S.X.H.G.
0.5673.0At3g10920820263MSD1 (MANGANESE SUPEROXIDE DISMUTASE 1)manganese superoxide dismutase (MSD1)S.X.H.G.
0.5166.3At1g79230844264MST1 (MERCAPTOPYRUVATE SULFURTRANSFERASE 1)encodes a sulfurtransferase/rhodaneses, which belongs to a group of enzymes widely distributed in all three phyla that catalyze the transfer of sulfur from a donor to a thiophilic acceptor substrate. The protein and transcript levels are NOT affected by senescence or exogenous cyanide, suggesting that sulfurtransferases are involved in cyanide detoxification.S.X.H.G.
0.4355.3At4g13360826967catalyticF:catalytic activity;P:metabolic process;C:unknown;BOMFPAS.X.H.G.
0.4152.4At1g47420841147-F:molecular_function unknown;P:biological_process unknown;C:mitochondrion, nucleus;POS.X.H.G.
0.3948.4At2g44060819011late embryogenesis abundant family protein / LEA family proteinF:molecular_function unknown;P:embryonic development ending in seed dormancy, response to cadmium ion, response to desiccation;C:plasma membrane, membrane;PBOAS.X.H.G.
0.3948.4At5g13450831186ATP synthase delta chain, mitochondrial, putative / H(+)-transporting two-sector ATPase, delta (OSCP) subunit, putativeF:hydrogen ion transporting ATP synthase activity, rotational mechanism;P:ATP synthesis coupled proton transport;C:mitochondrion, chloroplast, plasma membrane, membrane, mitochondrial proton-transporting ATP synthase complex, catalytic core F(1);BOMPFS.X.H.G.
0.3745.0At5g08530830752CI51 (51 kDa subunit of complex I)F:4 iron, 4 sulfur cluster binding, NAD or NADH binding, FMN binding, NADH dehydrogenase (ubiquinone) activity, oxidoreductase activity, acting on NADH or NADPH;P:mitochondrial electron transport, NADH to ubiquinone;C:mitochondrion, respiratory chain complex I;OBMFPAS.X.H.G.
0.3643.6At2g21870816723unknown proteinF:molecular_function unknown;P:biological_process unknown;C:mitochondrion, nucleolus, chloroplast, plastid, membrane;PMOBAS.X.H.G.
0.3541.6At2g24200816954cytosol aminopeptidaseF:manganese ion binding, metalloexopeptidase activity, aminopeptidase activity;P:response to cadmium ion, proteolysis;C:vacuole;OBMPFAS.X.H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
7.498.8GSM147963WT Globular Stage Seed 1GSE680Transcript Profiling of Arabidopsis Plant Life Cycle
7.398.8GSM75515Col-0 6h MOCK replicate 2GSE3350SLR/IAA14-dependent auxin induced lateral root initiation
6.998.7GSM147966lec1-1 Globular Stage Seed 2GSE1051Seed development in LEAFY COTYLEDON1 mutants
6.798.7GSM207296Seedling_ConstantWhiteLight_64hrGSE8365Identification of circadian-regulated genes of Arabidopsis thaliana.
6.798.7GSM207286Seedling_ConstantWhiteLight_24hrGSE8365Identification of circadian-regulated genes of Arabidopsis thaliana.
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.207e-961At1g67280843048lactoylglutathione lyase, putative / glyoxalase I, putativeF:lactoylglutathione lyase activity, metal ion binding;P:response to cold, carbohydrate metabolic process;C:thylakoid, thylakoid lumen, stromule, chloroplast, chloroplast stroma;BOMFPAC.G.S.X.
0.014e-136At3g62300825403agenet domain-containing proteinF:RNA binding;P:unknown;C:cellular_component unknown;PMOBC.G.S.X.
0.022e+034At5g57440835849GS1a member of haloacid dehalogenase-like hydrolase familyC.G.S.X.
0.022e+034At5g02760831234protein phosphatase 2C family protein / PP2C family proteinF:protein serine/threonine phosphatase activity, catalytic activity;P:protein amino acid dephosphorylation;C:protein serine/threonine phosphatase complex;PMOFBAVC.G.S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.456e-75282Glycine maxGma.5683.2.S1_atCA935387--7e-75At1g11840ATGLX1 (GLYOXALASE I HOMOLOG)C.G.S.X.
0.362e-1375Hordeum vulgareContig1934_atContig1934--7e-13At1g11840ATGLX1 (GLYOXALASE I HOMOLOG)C.G.S.X.
0.272e-1377Oryza sativaOs08g0191700AK066092.1-Glyoxalase I family protein2e-13At1g11840ATGLX1 (GLYOXALASE I HOMOLOG)C.G.S.X.
0.545e-60232Populus trichocarpaPtp.4360.1.S1_s_atBU831376hypothetical protein-4e-60At1g11840ATGLX1 (GLYOXALASE I HOMOLOG)C.G.S.X.
0.243e-1479Triticum aestivumTa.1842.2.S1_atBJ321503--5e-14At1g11840ATGLX1 (GLYOXALASE I HOMOLOG)C.G.S.X.
0.622e-71268Vitis vinifera1609781_s_atCB341681hypothetical protein LOC100257313-1e-66At1g11840ATGLX1 (GLYOXALASE I HOMOLOG)C.G.S.X.
0.283e-1891Zea maysZm.5962.1.S1_a_atAY241545.1glyoxalase I-1e-17At1g11840ATGLX1 (GLYOXALASE I HOMOLOG)C.G.S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
XGO:0046686A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cadmium (Cd) ion stimulus.
CGO:0005975The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

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