Gene omics information

Query gene ID At1g11540
Gene name unknown protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.5065.3At1g11540837697unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;OBAPS.X.H.G.
0.9296.0At1g08090837327ATNRT2:1 (NITRATE TRANSPORTER 2:1)High-affinity nitrate transporter. Up-regulated by nitrate. Functions as a repressor of lateral root initiation independently of nitrate uptake.S.X.H.G.
0.8894.0At1g70880843425Bet v I allergen family proteinF:molecular_function unknown;P:response to biotic stimulus, defense response;C:cellular_component unknown;PS.X.H.G.
0.8894.0At5g37450833722leucine-rich repeat transmembrane protein kinase, putativeF:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:endomembrane system;MPOBFVAS.X.H.G.
0.8693.1At4g08620826426SULTR1High affinity sulfate transporter. Contains STAS domain, essential for sulfur uptake function. Expressed in roots and guard cells. Up-regulated by sulfur deficiency. Down-regulated by cytokinin. Localized to the plasma membrane.S.X.H.G.
0.8089.8At1g49860841409ATGSTF14Encodes glutathione transferase belonging to the phi class of GSTs. Naming convention according to Wagner et al. (2002).S.X.H.G.
0.6478.9At1g26250839166proline-rich extensin, putativeF:structural constituent of cell wall;P:plant-type cell wall organization;C:endomembrane system;MPBOFVAS.X.H.G.
0.6075.7At1g33840840280unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PFS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
144.699.9E-MEXP-828-raw-cel-1156922509
138.199.9E-MEXP-828-raw-cel-1156922829
134.199.9E-MEXP-828-raw-cel-1156922386
126.199.9E-MEXP-828-raw-cel-1156922342
126.199.9E-MEXP-828-raw-cel-1156922923
120.999.9E-MEXP-828-raw-cel-1156922809
109.799.9E-MEXP-828-raw-cel-1156922368
107.099.9E-MEXP-828-raw-cel-1156922296
100.699.9E-MEXP-828-raw-cel-1156922708
97.799.9E-MEXP-828-raw-cel-1156922455
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.602e-93343At1g61740842471unknown proteinF:unknown;P:unknown;C:endomembrane system, integral to membrane;BOPAC.G.S.X.
0.171e-757At4g21250827874unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system, integral to membrane;OBPAC.G.S.X.
0.081e-448At4g21260827875unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system, integral to membrane;OBPAC.G.S.X.
0.029e-342At3g55780824744glycosyl hydrolase family 17 proteinF:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:endomembrane system;PFOC.G.S.X.
0.011e-138At1g11680837712CYP51G1 (CYTOCHROME P450 51G1)putative obtusifoliol 14-alpha demethylase involved in sterol biosynthesis.C.G.S.X.
0.035e-136At5g410716241290unknown proteinF:unknown;P:unknown;C:unknownC.G.S.X.
0.015e-136At3g56040824770UGP3 (UDP-GLUCOSE PYROPHOSPHORYLASE 3)F:unknown;P:biological_process unknown;C:chloroplast;PFOMBC.G.S.X.
0.025e-136At3g15020820731malate dehydrogenase (NAD), mitochondrial, putativeF:in 6 functions;P:defense response to bacterium;C:mitochondrion, apoplast, membrane;BOMPFAC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.032e-138Glycine maxGma.2841.2.S1_s_atBM523133--2e-5At4g10970unknown proteinC.G.S.X.
0.023e-136Hordeum vulgareHY07C01u_atHY07C01u--5e-2At1g69780ATHB13C.G.S.X.
0.021e+036Oryza sativaOs06g02659009634.m01559-Plant specific of unknown function DUF860 familyprotein1e-1At2g31290ubiquitin thiolesteraseC.G.S.X.
0.175e-550Populus trichocarpaPtp.3711.1.S1_s_atDN493224hypothetical protein-3e-5At1g11540unknown proteinC.G.S.X.
0.032e+034Triticum aestivumTa.30664.1.S1_atBT009339.1--2e-1At5g40550unknown proteinC.G.S.X.
0.026e-134Vitis vinifera1620221_atCF517910--1e+0At5g37440DNAJ heat shock N-terminal domain-containing proteinC.G.S.X.
0.024e+032Zea maysZmAffx.241.1.A1_atAI670253--3e+0At1g75190unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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