Gene omics information

Query gene ID At1g11210
Gene name unknown protein
Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.4050.8At1g11210837662unknown proteinF:molecular_function unknown;P:response to oxidative stress;C:endomembrane system;POS.X.H.G.
0.6781.6At1g51090841532heavy-metal-associated domain-containing proteinF:metal ion binding;P:metal ion transport;C:cellular_component unknown;PBOMVFS.X.H.G.
0.4050.8At4g33980829544unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PFMOS.X.H.G.
0.2930.3At5g42900834301unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.2217.5At5g52310835307LTI78 (LOW-TEMPERATURE-INDUCED 78)cold regulated gene, the 5' region of cor78 has cis-acting regulatory elements that can impart cold-regulated gene expressionS.X.H.G.
Click here to hide the above table.

Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
130.599.9GSM131275AtGen_6-1511_Cold(4°C)-Shoots-12.0h_Rep1GSE5621AtGenExpress: Stress Treatments (Cold stress)
126.099.9GSM131276AtGen_6-1512_Cold(4°C)-Shoots-12.0h_Rep2GSE5621AtGenExpress: Stress Treatments (Cold stress)
89.399.9GSM131279AtGen_6-1611_Cold(4°C)-Shoots-24.0h_Rep1GSE5621AtGenExpress: Stress Treatments (Cold stress)
70.499.9GSM131271AtGen_6-1411_Cold(4°C)-Shoots-6.0h_Rep1GSE5621AtGenExpress: Stress Treatments (Cold stress)
Click here to hide the above table.

Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.121e-757At1g61260842420unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;POC.G.S.X.
0.102e-654At1g11220837663unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PC.G.S.X.
0.051e-448At1g11230837664unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PC.G.S.X.
0.012e-344At5g45840834624leucine-rich repeat transmembrane protein kinase, putativeF:protein binding, protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:endomembrane system;PMOBFVAC.G.S.X.
0.013e-240At2g14960815985GH3.1encodes a protein similar to IAA-amido synthases. Lines carrying an insertion in this gene are hypersensitive to auxin.C.G.S.X.
0.011e-138At5g452752746193-F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PFBOAMC.G.S.X.
0.011e-138At5g49840835047ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide binding / protein bindingF:protein binding, nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding;P:protein transport;C:unknown;BOMFPAC.G.S.X.
0.021e-138At5g61720836294unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PMC.G.S.X.
Click here to hide the above table.

Orthologous genes

Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.032e-138Glycine maxGma.9254.1.S1_atCD391745--3e-10At5g45010ATDSS1(V) (Arabidopsis dss1 homolog on chromosome V)C.G.S.X.
0.032e-136Hordeum vulgareHM08L19r_atHM08L19r--3e-2At3g09980unknown proteinC.G.S.X.
0.022e-138Oryza sativaOsAffx.823.1.S1_at---0C.G.S.X.
0.024e-240Populus trichocarpaPtpAffx.113548.1.S1_atCK101236heavy metal ATPase-1e-1At3g22120CWLP (CELL WALL-PLASMA MEMBRANE LINKER PROTEIN)C.G.S.X.
0.031e-138Triticum aestivumTa.10439.1.A1_atBJ251378--1e+0At4g28395ATA7C.G.S.X.
0.025e-134Vitis vinifera1618587_atCF518131hypothetical protein LOC100247858-1e+0At3g25190nodulin, putativeC.G.S.X.
0.048e-134Zea maysZm.348.1.A1_x_atU62751.1acidic ribosomal protein P3-1e-1At1g64620Dof-type zinc finger domain-containing proteinC.G.S.X.
Click here to hide the above table.

Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
XGO:0006979A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals.
Click here to hide the above table.

Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

Click here to hide the above table.

Back to the CoP portal site

Back to the KAGIANA project homepage