Gene omics information

Query gene ID At1g11040
Gene name DNAJ chaperone C-terminal domain-containing protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.4862.5At1g11040837645DNAJ chaperone C-terminal domain-containing proteinF:unfolded protein binding, heat shock protein binding;P:protein folding;C:cellular_component unknown;OBMFPAVS.X.H.G.
0.6378.1At4g12860826898UNE14 (unfertilized embryo sac 14)F:calcium ion binding;P:double fertilization forming a zygote and endosperm;C:cellular_component unknown;MOPFBS.X.H.G.
0.6378.1At2g24320816968unknown proteinF:unknown;P:N-terminal protein myristoylation;C:cellular_component unknown;OBMPFVAS.X.H.G.
0.5773.8At3g48010823956ATCNGC16member of Cyclic nucleotide gated channel familyS.X.H.G.
0.4761.2At3g47660823920Ran GTPase binding / chromatin binding / zinc ion bindingF:chromatin binding, zinc ion binding, Ran GTPase binding;P:unknown;C:unknown;MOBPFAVS.X.H.G.
0.3846.7At3g28630822493-F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PMS.X.H.G.
0.3846.7At4g34940829646ARO1 (ARMADILLO REPEAT ONLY 1)Armadillo repeat protein. One of a family of four in Arabidopsis. Located in the nucleus and cytoplasm of pollen vegetative cells, and in the cytoplasm of egg cells. Involved in the signaling network controlling tip growth and actin organization in the pollen tube.S.X.H.G.
0.3541.6At1g69280843259unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOPFBS.X.H.G.
0.3439.8At1g24330839049armadillo/beta-catenin repeat family protein / U-box domain-containing family proteinF:ubiquitin-protein ligase activity, binding;P:protein ubiquitination;C:chloroplast;PMOFBVS.X.H.G.
0.2624.4At1g77730844109pleckstrin homology (PH) domain-containing proteinF:phosphoinositide binding;P:signal transduction;C:chloroplast;MFPOS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
407.6100.0GSM184551Whole roots 2hr KCl control treated then incubated in protoplast-generating solution minus enzymes, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis root
237.6100.0GSM184537Whole roots 2hr KCl control treated then frozen, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis root
192.0100.0GSM253646Low_Mo_seg_pool_Ler_col_F2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
188.1100.0GSM184556Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis root
167.3100.0GSM253650Ler 3GSE10039Low_Mo_Arabidopsis_mapping_MOT1
161.699.9GSM205432Col_ leaf_ wildtype_rep01GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
142.199.9GSM253645High_Mo_seg_pool_Ler_col_F2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
139.699.9GSM205435Col_ leaf_ wildtype_rep02GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
139.399.9GSM253652Ler 2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
135.599.9GSM253651Ler 1GSE10039Low_Mo_Arabidopsis_mapping_MOT1
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Homologous genes



Paralogous genes



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HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.024e-240At3g08910820040DNAJ heat shock protein, putativeF:unfolded protein binding, heat shock protein binding;P:protein folding;C:cellular_component unknown;OBMFPAVC.G.S.X.
0.022e-138At5g62800836401seven in absentia (SINA) family proteinF:ubiquitin-protein ligase activity, protein binding, zinc ion binding;P:multicellular organismal development, protein ubiquitination, ubiquitin-dependent protein catabolic process;C:nucleus;MPOFC.G.S.X.
0.022e-138At4g28480828965DNAJ heat shock family proteinF:unfolded protein binding, heat shock protein binding;P:protein folding;C:cellular_component unknown;OBMFPAVC.G.S.X.
0.012e-138At3g10360820198APUM4 (Arabidopsis Pumilio 4)F:RNA binding, binding;P:biological_process unknown;C:cellular_component unknown;FOMPBC.G.S.X.
0.042e-138At2g20550816577DNAJ chaperone C-terminal domain-containing proteinF:unfolded protein binding;P:protein folding;C:cellular_component unknown;BOMFPAVC.G.S.X.
0.022e-138At2g20430816562RIC6 (ROP-INTERACTIVE CRIB MOTIF-CONTAINING PROTEIN 6)encodes a member of a novel protein family that contains contain a CRIB (for Cdc42/Rac-interactive binding) motif required for their specific interaction with GTP-bound Rop1 (plant-specific Rho GTPase). Most similar to RIC7 and RIC8 (subfamily group II). Gene is expressed predominantly in inflorescence and flower tissue.C.G.S.X.
0.022e-138At2g20560816578DNAJ heat shock family proteinF:unfolded protein binding, heat shock protein binding;P:protein folding;C:cellular_component unknown;OBMFPAVC.G.S.X.
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Orthologous genes



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HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.032e-138Glycine maxGmaAffx.74022.1.S1_atBM891230--3e-7At4g28480DNAJ heat shock family proteinC.G.S.X.
0.021e+034Hordeum vulgareContig7490_atContig7490--2e-17At4g28480DNAJ heat shock family proteinC.G.S.X.
0.028e-240Oryza sativaOs.8452.1.S1_at---0C.G.S.X.
0.044e-654Populus trichocarpaPtpAffx.201860.1.S1_atpmrna3693hypothetical protein-1e-6At1g11040DNAJ chaperone C-terminal domain-containing proteinC.G.S.X.
0.035e-550Triticum aestivumTa.4684.1.A1_atBJ267127--1e-3At2g20560DNAJ heat shock family proteinC.G.S.X.
0.028e-134Vitis vinifera1613420_atCA809415--3e-1At5g49490AGL83 (AGAMOUS-LIKE 83)C.G.S.X.
0.021e+034Zea maysZm.3255.1.A1_atBG842791hypothetical protein LOC100194287-1e+0At1g49720ABF1 (ABSCISIC ACID RESPONSIVE ELEMENT-BINDING FACTOR 1)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
CGO:0006457The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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