Gene omics information

Query gene ID At1g10340
Gene name ankyrin repeat family protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At1g10340837573ankyrin repeat family proteinF:protein binding;P:biological_process unknown;C:cellular_component unknown;MOPBFVAS.X.H.G.
0.6781.6At4g14365827080zinc finger (C3HC4-type RING finger) family protein / ankyrin repeat family proteinF:protein binding, zinc ion binding;P:unknown;C:unknown;MOBFPVAS.X.H.G.
0.6781.6At4g33050829442EDA39 (embryo sac development arrest 39)F:calmodulin binding;P:polar nucleus fusion, response to chitin;C:cellular_component unknown;PFOS.X.H.G.
0.6075.7At5g25440832618protein kinase family proteinF:protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation, N-terminal protein myristoylation;C:nucleus, cytoplasm;MPOBFVAS.X.H.G.
0.4050.8At1g07000837210ATEXO70B2 (exocyst subunit EXO70 family protein B2)A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
117.799.9GSM128662Underwood_1-15_Cor-5x10e7-10h_Rep3_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
70.499.9GSM128661Underwood_1-14_Cor-5x10e7-10h_Rep2_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
63.499.8GSM128683Underwood_1-36_E.coli-0157-H7-10e8-7h_Rep2_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
62.599.8GSM128677Underwood_1-30_DC3000-10e8-7h_Rep3_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
61.899.8GSM142852MG001_ATH1_A5-Torres-2N3GSE6176Impact of Type III effectors on plant defense responses
58.799.8GSM128664Underwood_1-18_Cor-hrpS-5x10e7-10h_Rep3_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
57.199.8GSM142853MG001_ATH1_A6-Torres-2N6GSE6176Impact of Type III effectors on plant defense responses
57.099.8GSM128660Underwood_1-13_Cor-5x10e7-10h_Rep1_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
55.899.8GSM128676Underwood_1-29_DC3000-10e8-7h_Rep2_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
49.199.8GSM128687Underwood_1-40_E.coli-TUV86-2-fliC-10e8-7h_Rep3_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.710690At2g24600816996ankyrin repeat family proteinF:protein binding;P:biological_process unknown;C:cellular_component unknown;MOPBFVAC.G.S.X.
0.032e-552At1g34050840302ankyrin repeat family proteinF:protein binding;P:biological_process unknown;C:cellular_component unknown;MOPFBVAC.G.S.X.
0.046e-240At5g54710835560ankyrin repeat family proteinF:protein binding;P:biological_process unknown;C:endomembrane system;MOPBFVAC.G.S.X.
0.019e-136At5g67360836871ARA12Encodes a subtilisin-like serine protease essential for mucilage release from seed coats.C.G.S.X.
0.019e-136At5g62270836348-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PFMOC.G.S.X.
0.019e-136At4g34030829549MCCB (3-METHYLCROTONYL-COA CARBOXYLASE)MCC-B is involved in leucine degradation in mitochondria. The active protein is a dimer of MCC-A and MCC-B. MCC-A is biotinylated whereas MCC-B is not.C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.045e-654Glycine maxGmaAffx.24398.1.A1_atBU547594--1e-4At1g34050ankyrin repeat family proteinC.G.S.X.
0.022e+034Hordeum vulgareContig23720_atContig23720--5e-1At5g2244060S ribosomal protein L10A (RPL10aC)C.G.S.X.
0.027e+034Oryza sativaOsAffx.16341.1.S1_at---0C.G.S.X.
0.021e+036Populus trichocarpaPtpAffx.224783.1.S1_s_atpmrna43629hypothetical protein-6e-1At4g36420ribosomal protein L12 family proteinC.G.S.X.
0.024e+034Triticum aestivumTaAffx.105729.1.S1_atCA730654--3e+0At2g25080ATGPX1 (GLUTATHIONE PEROXIDASE 1)C.G.S.X.
0.027e-548Vitis vinifera1622741_atCB343444--2e-1At4g05040ankyrin repeat family proteinC.G.S.X.
0.012e+034Zea maysZm.5995.2.S1_a_atAI666102--2e+0At4g14385-C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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