Gene omics information

Query gene ID At1g09400
Gene name 12-oxophytodienoate reductase, putative
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At1g0940083746212-oxophytodienoate reductase, putativeF:unknown;P:unknown;C:mitochondrion;BOFPAMS.X.H.G.
0.6478.9At4g11490826754protein kinase family proteinF:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVAS.X.H.G.
0.5673.0At2g39320818517OTU-like cysteine protease family proteinF:cysteine-type peptidase activity;P:biological_process unknown;C:cellular_component unknown;MOFBPVAS.X.H.G.
0.5673.0At3g45460823686zinc ion bindingF:zinc ion binding;P:biological_process unknown;C:cellular_component unknown;MPOFS.X.H.G.
0.5267.4At3g51570824320disease resistance protein (TIR-NBS-LRR class), putativeF:transmembrane receptor activity, protein binding, ATP binding;P:signal transduction, defense response, apoptosis, innate immune response;C:membrane;PMBOFAVS.X.H.G.
0.5267.4At2g23945816927chloroplast nucleoid DNA-binding protein-relatedF:aspartic-type endopeptidase activity;P:proteolysis;C:endomembrane system;PMOFS.X.H.G.
0.5166.3At2g34280817989S locus F-box-related / SLF-relatedF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POS.X.H.G.
0.5166.3At2g39160818501unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.4963.5At1g53360841772F-box family protein-relatedF:molecular_function unknown;P:biological_process unknown;C:unknown;PS.X.H.G.
0.4862.5At3g18460821375unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMFOS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
780.5100.0GSM184551Whole roots 2hr KCl control treated then incubated in protoplast-generating solution minus enzymes, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis root
171.8100.0GSM143308Tsu_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
167.8100.0GSM184556Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis root
156.899.9GSM143300Ts_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
149.399.9GSM143301Ts_genomic_hyb_2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
141.599.9GSM143307Low_Na_seg_pool_tsu_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
133.299.9GSM143302Ts_genomic_hyb_1GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
127.899.9GSM143298Low_Na_seg_pool_ts_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
126.699.9GSM253648Col-0-1GSE10039Low_Mo_Arabidopsis_mapping_MOT1
117.999.9GSM226530LCOLUMELLASBGSE8934A high resolution organ expression map reveals novel expression patterns and predicts cellular function
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.364e-1479At1g76680844001OPR1Encodes a a member of an alpha/beta barrel fold family of FMN-containing oxidoreductases. One of two closely related 12-oxophytodienoic acid reductases. This enzyme is not expected to participate in jasmonic acid biosynthesis because during in vitro assays, it shows very little activity with the naturally occurring OPDA isomer. Up-regulated by senescence and jasmonic acid. Induced by salicylic acid. Independent of NPR1 for their induction by salicylic acid.C.G.S.X.
0.274e-1479At1g76690844002OPR2Encodes one of two closely related 12-oxophytodienoic acid reductases. This enzyme is not expected to participate in jasmonic acid biosynthesis because during in vitro assays, it shows very little activity with the naturally occurring OPDA isomer.C.G.S.X.
0.298e-961At1g1802083838212-oxophytodienoate reductase, putativeF:unknown;P:unknown;C:unknown;BOFPAMC.G.S.X.
0.298e-961At1g1799083837912-oxophytodienoate reductase, putativeF:unknown;P:unknown;C:unknown;BOFPAMC.G.S.X.
0.011e-138At1g26370839179RNA helicase, putativeF:in 6 functions;P:biological_process unknown;C:chloroplast;MBOFVPAC.G.S.X.
0.025e-136At5g59990836121-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POMC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.107e-136Glycine maxGmaAffx.67883.1.S1_atBG046605--1e-15At1g76690OPR2C.G.S.X.
0.034e-342Hordeum vulgareContig6194_s_atContig6194--2e+0At1g76680OPR1C.G.S.X.
0.061e-346Oryza sativaOs.15627.1.A1_at---0C.G.S.X.
0.113e-1583Populus trichocarpaPtpAffx.26497.1.S1_atCK105060--3e-52At1g76690OPR2C.G.S.X.
0.063e-240Triticum aestivumTa.1207.1.S1_x_atCA650490--4e-2At1g0940012-oxophytodienoate reductase, putativeC.G.S.X.
0.197e-1683Vitis vinifera1607601_atCF209956hypothetical protein LOC100244746-2e-15At1g0940012-oxophytodienoate reductase, putativeC.G.S.X.
0.109e-1063Zea maysZm.7548.1.A1_atBM07890312-oxo-phytodienoic acid reductase5-5e-11At1g76690OPR2C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name
00056Link to KaPPA-View 4Jasmonic acid biosynthesis



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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