Gene omics information

Query gene ID At1g08930
Gene name ERD6 (EARLY RESPONSE TO DEHYDRATION 6)
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.9195.6At1g08930837414ERD6 (EARLY RESPONSE TO DEHYDRATION 6)encodes a putative sucrose transporter whose gene expression is induced by dehydration and cold.S.X.H.G.
0.8391.4At4g38550830012-F:unknown;P:unknown;C:chloroplast;MFPOBVAS.X.H.G.
0.5773.8At1g59870842281PEN3 (PENETRATION 3)ATP binding cassette transporter. Localized to the plasma membrane in uninfected cells. In infected leaves, the protein concentrated at infection sites. Contributes to nonhost resistance to inappropriate pathogens that enter by direct penetration in a salicylic acid–dependent manner. Required for mlo resistance. Has Cd transporter activity (Cd2+ extrusion pump) and contributes to heavy metal resistance.S.X.H.G.
0.5773.8At2g44490819056PEN2 (PENETRATION 2)Encodes a glycosyl hydrolase that localizes to peroxisomes and acts as a component of an inducible preinvasion resistance mechanism. Required for mlo resistance.S.X.H.G.
0.4355.3At3g11820820355SYP121 (SYNTAXIN OF PLANTS 121)Encodes a syntaxin localized at the plasma membrane (SYR1, Syntaxin Related Protein 1, also known as SYP121, PENETRATION1/PEN1). SYR1/PEN1 is a member of the SNARE superfamily proteins. SNARE proteins are involved in cell signaling, vesicle traffic, growth and development. SYR1/PEN1 functions in positioning anchoring of the KAT1 K+ channel protein at the plasma membrane. Transcription is upregulated by abscisic acid, suggesting a role in ABA signaling. Also functions in non-host resistance against barley powdery mildew, Blumeria graminis sp. hordei. SYR1/PEN1 is a nonessential component of the preinvasive resistance against Colletotrichum fungus. Required for mlo resistance.S.X.H.G.
0.2522.6At5g61210836242SNAP33 (SOLUBLE N-ETHYLMALEIMIDE-SENSITIVE FACTOR ADAPTOR PROTEIN 33)membrane localized t-SNARE SNAP25 homologue, probably involved in cytokinesis and cell plate formationS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
19.199.6E-MEXP-98-raw-cel-320188859
18.699.5GSM13783Dexamethasone plus cycloheximide - replicateGSE911Identification of LEAFY targets during reproductive transition
18.499.5GSM13779Dexamethasone plus cycloheximideGSE911Identification of LEAFY targets during reproductive transition
18.299.5GSM13780CycloheximideGSE911Identification of LEAFY targets during reproductive transition
16.099.5E-NASC-76-raw-cel-1359879184
15.499.5E-MEXP-1725-raw-cel-1669614572
15.399.4E-MEXP-98-raw-cel-320189079
14.899.4E-MEXP-1725-raw-cel-1669614613
14.699.4E-MEXP-1725-raw-cel-1669614592
14.599.4E-MEXP-98-raw-cel-320189024
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.108e-1065At1g08920837413sugar transporter, putativeF:carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity;P:transport, transmembrane transport;C:integral to membrane, membrane;BFMPOAC.G.S.X.
0.113e-963At1g08900837411carbohydrate transmembrane transporterF:carbohydrate transmembrane transporter activity;P:transport, transmembrane transport;C:integral to membrane, membrane;MBFPOAC.G.S.X.
0.072e-757At3g05400819704sugar transporter, putativeF:carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity;P:transport, transmembrane transport;C:integral to membrane, membrane;BMFPOAC.G.S.X.
0.022e-448At3g05155819678sugar transporter, putativeF:substrate-specific transmembrane transporter activity, carbohydrate transmembrane transporter activity, transporter activity, sugar:hydrogen symporter activity;P:transport, transmembrane transport;C:integral to membrane, membrane;BFMPOAC.G.S.X.
0.042e-448At1g54720841913early-responsive to dehydration protein-related / ERD protein-relatedF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.047e-240Glycine maxGmaAffx.79701.1.S1_atAW349693--2e-25At1g75220integral membrane protein, putativeC.G.S.X.
0.029e-238Hordeum vulgarebags16h04_atbags16h04--9e-5At3g05400sugar transporter, putativeC.G.S.X.
0.022e+036Oryza sativaOs05g0567700AK065497.1-Integral membrane protein2e-5At1g75220integral membrane protein, putativeC.G.S.X.
0.043e-138Populus trichocarpaPtpAffx.210935.1.S1_atpmrna21488hypothetical protein-1e-5At3g05400sugar transporter, putativeC.G.S.X.
0.031e-552Triticum aestivumTaAffx.28232.1.S1_atCA663132--1e-2At3g05155sugar transporter, putativeC.G.S.X.
0.021e-240Vitis vinifera1612342_atCF207490--4e+0At5g15802unknown proteinC.G.S.X.
0.022e+130Zea maysZmAffx.183.1.A1_atAI668346--3e+0At5g57510unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
XGO:0010200A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a chitin stimulus.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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