CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At1g08430

Gene name ALMT1 (ALUMINUM-ACTIVATED MALATE TRANSPORTER 1)

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
0.15 7.8 At1g08430 837363 ALMT1 (ALUMINUM-ACTIVATED MALATE TRANSPORTER 1) Encodes a Al-activated malate efflux transporter. Is essential for aluminum tolerance but does not represent the major Al tolerance QTL. Staurosporine and calyculin A both block all changes in AtALMT1 gene expression (as a result malate release is totally inhibited). S.X. H.G.
0.20 14.4 At2g04040 814938 TX1 AtDTX1 (At2g04040) has been identified as a detoxifying efflux carrier for plant-derived antibiotics and other toxic compounds, including CD2+. S.X. H.G.
0.20 14.4 At4g02170 828119 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P S.X. H.G.
0.13 5.8 At2g19990 816518 PR-1-LIKE (PATHOGENESIS-RELATED PROTEIN-1-LIKE) Encodes a PR-1-like protein homolog that is differentially expressed in resistant compared to susceptible cultivars by powdery mildew infection. The deduced amino acid sequence has 24 amino acids comprising the signal peptide and 140 amino acids of the mature peptide (15 kDa). Northern blot analysis showed accumulation of the corresponding mRNA 12 h after inoculation of resistant barley cultivars with Erysiphe graminis. Though the Genbank record for the cDNA associated to this gene model is called 'PR-1', the sequence actually corresponds to PR-1-like. Expression of this gene is not salicylic-acid responsive. S.X. H.G.
0.11 4.1 At1g52940 841727 PAP5 (PURPLE ACID PHOSPHATASE 5) F:protein serine/threonine phosphatase activity, acid phosphatase activity;P:biological_process unknown;C:cellular_component unknown;PBOMFA S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
185.6 100.0 E-MEXP-1797-raw-cel-1669767994
177.6 100.0 E-MEXP-1797-raw-cel-1669767976
176.7 100.0 E-MEXP-1797-raw-cel-1669767985
161.5 99.9 E-MEXP-1797-raw-cel-1669768066
159.7 99.9 E-MEXP-1797-raw-cel-1669767967
147.5 99.9 E-MEXP-1797-raw-cel-1669768030
147.4 99.9 E-MEXP-1797-raw-cel-1669768048
145.7 99.9 E-MEXP-1797-raw-cel-1669768012
124.2 99.9 E-MEXP-1797-raw-cel-1669767958
107.0 99.9 E-MEXP-1797-raw-cel-1669767940
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.79 0 1128 At1g08440 837364 - F:unknown;P:unknown;C:unknown;PBOF C.G. S.X.
0.51 2e-26 121 At2g27240 817266 unknown protein F:unknown;P:biological_process unknown;C:unknown;PBOF C.G. S.X.
0.02 5e-2 40 At2g17680 816275 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P C.G. S.X.
0.02 5e-2 40 At2g45403 819147 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P C.G. S.X.
0.01 2e-1 38 At5g46600 834703 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PBOF C.G. S.X.
0.01 7e-1 36 At3g15200 820751 pentatricopeptide (PPR) repeat-containing protein F:unknown;P:biological_process unknown;C:cytosolic ribosome;POFMA C.G. S.X.
0.01 7e-1 36 At3g49790 824141 ATP binding F:ATP binding;P:biological_process unknown;C:unknown;P C.G. S.X.
0.02 7e-1 36 At2g34060 817967 peroxidase, putative F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFOM C.G. S.X.
0.01 7e-1 36 At2g18980 816415 peroxidase, putative F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFOBM C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 3e-1 38 Glycine max GmaAffx.92778.1.S1_s_at CF808503 NAC domain protein NAC1 /// NAC domain protein - 2e+0 At4g19645 - C.G. S.X.
0.02 1e+0 34 Hordeum vulgare HW09K16u_at HW09K16u - - 9e-2 At2g04400 indole-3-glycerol phosphate synthase (IGPS) C.G. S.X.
0.02 2e-6 56 Oryza sativa Os10g0572100 AK073002.1 - Protein of unknown function UPF0005 family protein 3e-4 At5g46610 unknown protein C.G. S.X.
0.11 3e-22 107 Populus trichocarpa PtpAffx.224167.1.S1_x_at pmrna42445 hypothetical protein - 5e-20 At1g08440 - C.G. S.X.
0.02 3e+0 34 Triticum aestivum TaAffx.106091.1.S1_at CA725506 - - 3e+0 At5g16486 - C.G. S.X.
0.02 9e-1 34 Vitis vinifera 1614435_at CD718750 - - 1e+0 At5g14640 SK13 (SHAGGY-LIKE KINASE 13) C.G. S.X.
0.02 1e+0 34 Zea mays Zm.341.2.S1_at AI881632 - - 8e-44 At5g07090 40S ribosomal protein S4 (RPS4B) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
X GO:0010044 A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an aluminum ion stimulus.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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