CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At1g08310

Gene name esterase/lipase/thioesterase family protein

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
1.00 100.0 At1g08310 837351 esterase/lipase/thioesterase family protein F:catalytic activity;P:biological_process unknown;C:unknown;BPOMFA S.X. H.G.
1.00 100.0 At1g17710 838347 phosphatase F:phosphatase activity;P:metabolic process;C:unknown;MPOBF S.X. H.G.
1.00 100.0 At2g11810 815657 MGDC MGD3 is the major enzyme for galactolipid metabolism during phosphate starvation. Does not contribute to galactolipid synthesis under P1-sufficient conditions. S.X. H.G.
1.00 100.0 At2g45130 819120 SPX3 (SPX DOMAIN GENE 3) F:molecular_function unknown;P:cellular response to phosphate starvation, positive regulation of cellular response to phosphate starvation;C:cellular_component unknown;FMPO S.X. H.G.
0.96 97.3 At5g20790 832202 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P S.X. H.G.
0.87 93.5 At1g19200 838503 senescence-associated protein-related F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P S.X. H.G.
0.83 91.4 At1g73010 843632 phosphatase F:phosphatase activity;P:metabolic process;C:cellular_component unknown;MPOBF S.X. H.G.
0.83 91.4 At3g02040 821175 SRG3 (senescence-related gene 3) F:phosphoric diester hydrolase activity, glycerophosphodiester phosphodiesterase activity;P:glycerol metabolic process, lipid metabolic process;C:unknown;BMOFPAV S.X. H.G.
0.79 89.1 At3g05630 819730 PLDP2 Encodes a member of the PXPH-PLD subfamily of phospholipase D proteins. Regulates vesicle trafficking. Required for auxin transport and distribution and hence auxin responses. This subfamily is novel structurally different from the majority of plant PLDs by having phox homology (PX) and pleckstrin homology (PH) domains. Involved regulating root development in response to nutrient limitation. Plays a major role in phosphatidic acid production during phosphate deprivation. Induced upon Pi starvation in both shoots and roots. Involved in hydrolyzing phosphatidylcholine and phosphatidylethanolamine to produce diacylglycerol for digalactosyldiacylglycerol synthesis and free Pi to sustain other Pi-requiring processes. Does not appear to be involved in root hair patterning. S.X. H.G.
0.75 86.9 At5g20150 832137 SPX1 (SPX DOMAIN GENE 1) F:molecular_function unknown;P:cellular response to phosphate starvation, positive regulation of cellular response to phosphate starvation;C:nucleus;FMPOBA S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
258.0 100.0 E-MEXP-791-raw-cel-1122937569
242.3 100.0 E-ATMX-31-raw-cel-1516947916
219.7 100.0 E-MEXP-791-raw-cel-1122937533
205.8 100.0 GSM133957 Fukuda_1-2_0B_Rep2_ATH1 GSE5748 In vitro tracheary element transdifferentiation of Col-0 suspension cells.
188.1 100.0 GSM184478 Lateral Root Cap root cells 2hr KCl control treated, biological rep3 GSE7631 Cell-specific nitrogen responses in the Arabidopsis root
163.0 99.9 GSM184477 Lateral Root Cap root cells 2hr KCl control treated, biological rep2 GSE7631 Cell-specific nitrogen responses in the Arabidopsis root
135.9 99.9 GSM184480 Lateral Root Cap root cells 2hr transitory KNO3 treated, biological rep2 GSE7631 Cell-specific nitrogen responses in the Arabidopsis root
135.9 99.9 E-ATMX-31-raw-cel-1516947882
123.8 99.9 E-MEXP-791-raw-cel-1122937551
116.7 99.9 E-MEXP-1797-raw-cel-1669767940
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.01 5e-1 36 At5g45250 834561 RPS4 (RESISTANT TO P. SYRINGAE 4) RPS4 belongs to the Toll/interleukin-1 receptor (TIR)-nucleotide binding site (NBS)-Leu-rich repeat (LRR) class of disease resistance (R ) genes. Confers specific resistance to Pseudomonas syringae pv. tomato carrying the avirulence gene AvrRPS4. Produces alternative transcripts with truncated open reading frames. C.G. S.X.
0.02 5e-1 36 At5g22460 832307 esterase/lipase/thioesterase family protein F:catalytic activity;P:biological_process unknown;C:cell wall, vacuole, plant-type cell wall;BPOF C.G. S.X.
0.02 2e+0 34 At5g42700 834279 transcriptional factor B3 family protein F:DNA binding;P:regulation of transcription, DNA-dependent;C:cellular_component unknown;PF C.G. S.X.
0.01 2e+0 34 At5g38150 833795 PMI15 (plastid movement impaired 15) Involved in chloroplast avoidance movement under high-light intensities C.G. S.X.
0.01 2e+0 34 At5g03680 831757 PTL (PETAL LOSS) Recessive mutations are defective in organ initiation and orientation in the second whorl. This gene encodes a trihelix transcription factor whose expression is limited to margins of floral and vegetative organs. Overexpression and double mutant analyses suggest that this gene is involved in limiting lateral growth of organs. C.G. S.X.
0.02 2e+0 34 At5g37850 833763 SOS4 (SALT OVERLY SENSITIVE 4) Encodes a pyridoxal kinase required for root hair development. Mutants are hypersensitive to Na+, K+ and Li+. C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 4e-8 59 Glycine max GmaAffx.35092.2.S1_at BM086463 - - 2e-8 At1g08310 esterase/lipase/thioesterase family protein C.G. S.X.
0.03 2e-5 50 Hordeum vulgare Contig10149_at Contig10149 - - 5e-5 At1g08310 esterase/lipase/thioesterase family protein C.G. S.X.
0.03 4e-3 44 Oryza sativa Os.13584.1.S1_at - - - 0 C.G. S.X.
0.12 5e-11 69 Populus trichocarpa PtpAffx.204390.1.S1_at pmrna8619 hypothetical protein - 4e-11 At1g08310 esterase/lipase/thioesterase family protein C.G. S.X.
0.04 2e-3 44 Triticum aestivum TaAffx.107244.1.S1_x_at CA624901 - - 2e-3 At1g08310 esterase/lipase/thioesterase family protein C.G. S.X.
0.10 1e-4 46 Vitis vinifera 1618818_at CB981892 hypothetical protein LOC100245043 - 9e-5 At5g22460 esterase/lipase/thioesterase family protein C.G. S.X.
0.03 8e-1 34 Zea mays Zm.15789.2.A1_at CF632627 - - 3e+0 At3g02885 GASA5 (GAST1 PROTEIN HOMOLOG 5) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
N GO:0008150 Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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