Gene omics information

Query gene ID At1g08090
Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At1g08090837327ATNRT2:1 (NITRATE TRANSPORTER 2:1)High-affinity nitrate transporter. Up-regulated by nitrate. Functions as a repressor of lateral root initiation independently of nitrate uptake.S.X.H.G.
0.8290.9At1g70880843425Bet v I allergen family proteinF:molecular_function unknown;P:response to biotic stimulus, defense response;C:cellular_component unknown;PS.X.H.G.
0.8089.8At1g49860841409ATGSTF14Encodes glutathione transferase belonging to the phi class of GSTs. Naming convention according to Wagner et al. (2002).S.X.H.G.
0.7788.0At4g08620826426SULTR1High affinity sulfate transporter. Contains STAS domain, essential for sulfur uptake function. Expressed in roots and guard cells. Up-regulated by sulfur deficiency. Down-regulated by cytokinin. Localized to the plasma membrane.S.X.H.G.
0.7586.9At5g37450833722leucine-rich repeat transmembrane protein kinase, putativeF:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:endomembrane system;MPOBFVAS.X.H.G.
0.7486.1At1g26250839166proline-rich extensin, putativeF:structural constituent of cell wall;P:plant-type cell wall organization;C:endomembrane system;MPBOFVAS.X.H.G.
0.5065.3At4g14630827113GLP9 (GERMIN-LIKE PROTEIN 9)germin-like protein with N-terminal signal sequence that may target it to the vacuole, plasma membrane and/or outside the cell.S.X.H.G.
0.4659.8At1g11540837697unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;OBAPS.X.H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
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Homologous genes

Paralogous genes

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HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.8001883At1g08100837328NRT2.2 (NITRATE TRANSPORTER 2.2)Encodes a high-affinity nitrate transporter.C.G.S.X.
0.426e-51202At5g60770836198ATNRT2.4member of High affinity nitrate transporter familyC.G.S.X.
0.112e-757At5g60780836199ATNRT2.3member of High affinity nitrate transporter familyC.G.S.X.
0.053e-344At1g12940837852ATNRT2.5 (nitrate transporter2.5)member of High affinity nitrate transporter familyC.G.S.X.
0.111e-242At3g45060823641ATNRT2.6member of High affinity nitrate transporter familyC.G.S.X.
0.013e+034At5g59750836096riboflavin biosynthesis protein, putativeF:3,4-dihydroxy-2-butanone-4-phosphate synthase activity, GTP cyclohydrolase II activity;P:riboflavin biosynthetic process;C:chloroplast;BOFAPC.G.S.X.
0.013e+034At5g14550831306unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;POC.G.S.X.
0.013e+034At5g60250836147zinc finger (C3HC4-type RING finger) family proteinF:protein binding, zinc ion binding, nucleic acid binding;P:unknown;C:unknown;MFPOBC.G.S.X.
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Orthologous genes

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HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.315e-49196Glycine maxGma.8482.1.S1_atAF047718.1NRT2 protein-1e-27At5g60770ATNRT2.4C.G.S.X.
0.171e-1377Hordeum vulgareContig26512_atContig26512--2e-13At1g08090ATNRT2:1 (NITRATE TRANSPORTER 2:1)C.G.S.X.
0.143e-861Oryza sativaOs02g0112600AK109733.1-Membrane transporter2e-8At1g08090ATNRT2:1 (NITRATE TRANSPORTER 2:1)C.G.S.X.
0.143e-1997Populus trichocarpaPtp.5713.2.S1_a_atAJ557585.1high affinity nitrate transporter-7e-6At5g60770ATNRT2.4C.G.S.X.
0.196e-859Triticum aestivumTa.2756.1.S1_atAY053452.1high-affinity nitrate transporter-6e-8At1g08090ATNRT2:1 (NITRATE TRANSPORTER 2:1)C.G.S.X.
0.014e+032Vitis vinifera1621163_atBQ799269hypothetical protein LOC100253488-1e-6At5g58490cinnamoyl-CoA reductase familyC.G.S.X.
0.109e-548Zea maysZm.10344.1.S1_atAY129953.1nrt2.1 protein-2e-4At1g08090ATNRT2:1 (NITRATE TRANSPORTER 2:1)C.G.S.X.
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Biological processes

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ECCGO IDProcess Name
XGO:0010167A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nitrate stimulus.
XGO:0015706The directed movement of nitrate into, out of, within or between cells.
XGO:0048527The process whose specific outcome is the progression of the lateral root over time, from its formation to the mature structure. A lateral root is one formed from pericycle cells located on the xylem radius of the root, as opposed to the initiation of the main root from the embryo proper.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

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