Gene omics information

Query gene ID At1g08040
Gene name unknown protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At1g08040837320unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;PBOS.X.H.G.
0.6075.7At3g05520819717F-actin capping protein alpha subunit family proteinF:actin binding;P:actin cytoskeleton organization;C:nucleus, F-actin capping protein complex;MFOPS.X.H.G.
0.3338.1At3g24010821986ING1 (INHIBITOR OF GROWTH 1)ING1 encodes a member of the Inhibitor of Growth family of nuclear-localized PhD domain containing homeodomain proteins. Binds to H3K4 di or trimethylated DNA.S.X.H.G.
0.3338.1At5g27710832833unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POS.X.H.G.
0.030.6At4g32660829401AME3Encodes protein kinase AME3.S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
22.299.6GSM253646Low_Mo_seg_pool_Ler_col_F2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
19.899.6GSM284389Arabidopsis GMPE2GSE11262Expression data from Arabidopsis Seed Compartments at the Globular Embryo Stage.
19.099.5GSM311294Laser capture microdissected (LCM) chalazal seed coat at the linear-cotyledon stage, biological replicate 2GSE12403Expression data from Arabidopsis seed compartments at the linear-cotyledon stage
18.799.5GSM284387Arabidopsis GSUS4bGSE11262Expression data from Arabidopsis Seed Compartments at the Globular Embryo Stage.
18.699.5GSM143299High_Na_seg_pool_ts_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
18.299.5GSM253651Ler 1GSE10039Low_Mo_Arabidopsis_mapping_MOT1
16.799.5GSM253648Col-0-1GSE10039Low_Mo_Arabidopsis_mapping_MOT1
15.599.5GSM253652Ler 2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
15.599.5GSM143306High_Na_seg_pool_tsu_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
14.999.4GSM253649Col-0-2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.750924At2g28310817377unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;PBOC.G.S.X.
0.425e-35149At1g67850843111unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PBOC.G.S.X.
0.213e-30133At3g26440822248unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PBOC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.482e-50200Glycine maxGma.16609.2.S1_atBM085783--9e-63At1g67850unknown proteinC.G.S.X.
0.251e-34147Hordeum vulgareContig17553_atContig17553--2e-34At1g08040unknown proteinC.G.S.X.
0.251e-43178Oryza sativaOs02g0297600AK122023.1-Protein of unknown function DUF707 family protein8e-20At1g67850unknown proteinC.G.S.X.
0.412e-32141Populus trichocarpaPtpAffx.71189.1.A1_a_atCV277875hypothetical protein-1e-32At1g08040unknown proteinC.G.S.X.
0.239e-34145Triticum aestivumTa.6006.1.S1_atCK216649--9e-34At1g08040unknown proteinC.G.S.X.
0.444e-104377Vitis vinifera1618128_atCB009517hypothetical protein LOC100267242-2e-112At2g28310unknown proteinC.G.S.X.
0.309e-35147Zea maysZm.6729.2.A1_atAI395991lysine ketoglutarate reductase trans-splicing related 1-4e-23At2g28310unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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