CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At1g07400

Gene name 17.8 kDa class I heat shock protein (HSP17.8-CI)

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
1.00 100.0 At1g07400 837252 17.8 kDa class I heat shock protein (HSP17.8-CI) F:unknown;P:response to oxidative stress, response to heat;C:unknown;BPOFAM S.X. H.G.
0.96 97.3 At1g74310 843771 ATHSP101 (ARABIDOPSIS THALIANA HEAT SHOCK PROTEIN 101) Encodes ClpB1, which belongs to the Casein lytic proteinase/heat shock protein 100 (Clp/Hsp100) family. Involved in refolding of proteins which form aggregates under heat stress. Also known as AtHsp101. AtHsp101 is a cytosolic heat shock protein required for acclimation to high temperature. S.X. H.G.
0.96 97.3 At2g20560 816578 DNAJ heat shock family protein F:unfolded protein binding, heat shock protein binding;P:protein folding;C:cellular_component unknown;OBMFPAV S.X. H.G.
0.95 97.0 At5g12030 831076 AT-HSP17.6A (ARABIDOPSIS THALIANA HEAT SHOCK PROTEIN 17.6A) Encodes a cytosolic small heat shock protein with chaperone activity that is induced by heat and osmotic stress and is also expressed late in seed development. S.X. H.G.
0.94 96.7 At1g53540 841789 17.6 kDa class I small heat shock protein (HSP17.6C-CI) (AA 1-156) F:unknown;P:response to heat;C:cellular_component unknown;BPOFAM S.X. H.G.
0.94 96.7 At2g29500 817499 17.6 kDa class I small heat shock protein (HSP17.6B-CI) F:molecular_function unknown;P:response to oxidative stress, response to cyclopentenone, response to high light intensity, response to hydrogen peroxide, response to heat;C:unknown;BPOFAM S.X. H.G.
0.94 96.7 At2g46240 819232 BAG6 (BCL-2-ASSOCIATED ATHANOGENE 6) A member of Arabidopsis BAG (Bcl-2-associated athanogene) proteins, plant homologs of mammalian regulators of apoptosis. Expression of BAG6 in leaves was strongly induced by heat stress. Knockout mutants exhibited enhanced susceptibility to fungal pathogen Botrytis cinerea. Plant BAG proteins are multi-functional and remarkably similar to their animal counterparts, as they regulate apoptotic-like processes ranging from pathogen attack, to abiotic stress, to plant development. S.X. H.G.
0.93 96.4 At4g12400 826849 stress-inducible protein, putative F:binding;P:response to high light intensity, response to hydrogen peroxide, response to heat, response to stress;C:cellular_component unknown;OBMPFAV S.X. H.G.
0.93 96.4 At5g12020 831075 HSP17.6II (17.6 KDA CLASS II HEAT SHOCK PROTEIN) F:unknown;P:response to heat;C:cellular_component unknown;BPOFAM S.X. H.G.
0.92 96.0 At1g16030 838174 Hsp70b (heat shock protein 70B) F:ATP binding;P:protein folding, response to heat;C:cytosol, cell wall, plasma membrane, chloroplast, membrane;BOMFPVA S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
201.8 100.0 E-MEXP-1725-raw-cel-1669614623
194.2 100.0 E-MEXP-98-raw-cel-320188969
148.2 99.9 GSM131453 AtGen_6-9321_Heatstress-Roots-3.0h_Rep1 GSE5628 AtGenExpress: Stress Treatments (Heat stress)
138.2 99.9 E-MEXP-1725-raw-cel-1669614634
134.5 99.9 GSM270868 Arabidopsis cell culture, 4 h_response to phytoprostane A1_rep2 GSE10719 Response of Arabidopsis cell culture to phytoprostane A1
130.1 99.9 GSM133720 Deeken_A-2-Deeke-Inf_SLD_REP1 GSE5725 Agrobacterium tumefaciens-induced tumour development of Arabidopsis thaliana
129.3 99.9 GSM131452 AtGen_6-9312_Heatstress-Shoots-3.0h_Rep2 GSE5628 AtGenExpress: Stress Treatments (Heat stress)
126.6 99.9 GSM270870 Arabidopsis cell culture, 4 h_response to phytoprostane A1_rep3 GSE10719 Response of Arabidopsis cell culture to phytoprostane A1
124.9 99.9 GSM131454 AtGen_6-9322_Heatstress-Roots-3.0h_Rep2 GSE5628 AtGenExpress: Stress Treatments (Heat stress)
115.9 99.9 E-MEXP-98-raw-cel-320188914
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.88 1e-114 412 At1g59860 842280 17.6 kDa class I heat shock protein (HSP17.6A-CI) F:unknown;P:response to heat;C:unknown;BPOFMA C.G. S.X.
0.69 7e-54 210 At2g29500 817499 17.6 kDa class I small heat shock protein (HSP17.6B-CI) F:molecular_function unknown;P:response to oxidative stress, response to cyclopentenone, response to high light intensity, response to hydrogen peroxide, response to heat;C:unknown;BPOFAM C.G. S.X.
0.38 4e-12 71 At1g53540 841789 17.6 kDa class I small heat shock protein (HSP17.6C-CI) (AA 1-156) F:unknown;P:response to heat;C:cellular_component unknown;BPOFAM C.G. S.X.
0.02 6e-2 38 At5g11000 830967 unknown protein F:molecular_function unknown;P:biological_process unknown;C:plasma membrane;P C.G. S.X.
0.10 6e-2 38 At5g37670 833746 15.7 kDa class I-related small heat shock protein-like (HSP15.7-CI) F:molecular_function unknown;P:response to heat;C:unknown;BPOFAM C.G. S.X.
0.01 2e-1 36 At1g70140 843350 ATFH8 (formin 8) Encodes a group I formin. Binds to F-actin barbed ends. Has severing actin filaments activity. Binds profilin. Involved in the initiation and tip growth of root hairs through regulation of actin cytoskeleton. C.G. S.X.
0.01 9e-1 34 At5g06680 830557 SPC98 (SPINDLE POLE BODY COMPONENT 98) Encodes protein similar to yeast SCP98. Yeast SCP98 is essential for the microtubule nucleation activity of the gamma-tubulin ring complexes. C.G. S.X.
0.04 9e-1 34 At3g30370 822738 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P C.G. S.X.
0.01 9e-1 34 At2g26570 817198 unknown protein F:molecular_function unknown;P:biological_process unknown;C:plasma membrane;MOBFPAV C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.25 3e-4 46 Glycine max Gma.17947.1.S1_at AW568567 - - 7e-18 At3g46230 ATHSP17.4 C.G. S.X.
0.15 2e-12 71 Hordeum vulgare Contig2006_s_at Contig2006 - - 4e-26 At3g46230 ATHSP17.4 C.G. S.X.
0.19 3e-5 50 Oryza sativa Os.57467.1.A1_x_at - - - 0 C.G. S.X.
0.33 1e-9 63 Populus trichocarpa Ptp.4187.1.S1_at CA930797 hypothetical protein - 2e-9 At1g07400 17.8 kDa class I heat shock protein (HSP17.8-CI) C.G. S.X.
0.14 4e-9 61 Triticum aestivum Ta.4427.1.S1_at CD491093 - - 7e-9 At1g07400 17.8 kDa class I heat shock protein (HSP17.8-CI) C.G. S.X.
0.26 1e-6 52 Vitis vinifera 1612385_at CB350287 hypothetical protein LOC100244376 - 5e-16 At2g29500 17.6 kDa class I small heat shock protein (HSP17.6B-CI) C.G. S.X.
0.15 1e-7 56 Zea mays Zm.2361.1.A1_at BM381388 hypothetical protein LOC100191552 - 3e-17 At1g53540 17.6 kDa class I small heat shock protein (HSP17.6C-CI) (AA 1-156) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
X GO:0006979 A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals.
C GO:0009408 A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a heat stimulus, a temperature stimulus above the optimal temperature for that organism.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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