CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At1g07340

Gene name ATSTP2 (SUGAR TRANSPORTER 2)

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
1.00 100.0 At1g07340 837245 ATSTP2 (SUGAR TRANSPORTER 2) F:carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity, monosaccharide transmembrane transporter activity;P:pollen development, monosaccharide transport;C:integral to plasma membrane, membrane;FBMPOA S.X. H.G.
1.00 100.0 At1g36150 840520 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein F:lipid binding;P:lipid transport;C:anchored to membrane;MOFPBVA S.X. H.G.
1.00 100.0 At3g58290 824998 meprin and TRAF homology domain-containing protein / MATH domain-containing protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;POMF S.X. H.G.
1.00 100.0 At5g53510 835433 ATOPT9 (ARABIDOPSIS THALIANA OLIGOPEPTIDE TRANSPORTER 9) oligopeptide transporter S.X. H.G.
0.96 97.3 At1g48940 841316 plastocyanin-like domain-containing protein F:electron carrier activity, copper ion binding;P:unknown;C:anchored to membrane;P S.X. H.G.
0.96 97.3 At1g61630 842459 equilibrative nucleoside transporter, putative (ENT7) F:nucleoside transmembrane transporter activity;P:transport;C:plasma membrane;MOPFB S.X. H.G.
0.96 97.3 At5g59040 836021 COPT3 encodes a member of copper transporter family and functionally complements a high affinity copper transporter mutant in yeast S.X. H.G.
0.95 97.0 At1g56360 842090 PAP6 (PURPLE ACID PHOSPHATASE 6) F:protein serine/threonine phosphatase activity, acid phosphatase activity;P:biological_process unknown;C:endomembrane system;PBOMFA S.X. H.G.
0.91 95.6 At1g79800 844319 plastocyanin-like domain-containing protein F:electron carrier activity, copper ion binding;P:unknown;C:anchored to membrane;P S.X. H.G.
0.91 95.6 At4g10260 826617 pfkB-type carbohydrate kinase family protein F:kinase activity, ribokinase activity;P:D-ribose metabolic process, acetate fermentation, sucrose biosynthetic process, sucrose catabolic process, using beta-fructofuranosidase;C:cellular_component unknown;BOPAMF S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
1092.3 100.0 GSM142737 DH001_ATH1_A4-UNM2 GSE6162 Transcriptome analysis of Arabidopsis microgametogenesis
1053.5 100.0 GSM142734 DH001_ATH1_A1-UNM1 GSE6162 Transcriptome analysis of Arabidopsis microgametogenesis
699.3 100.0 GSM142738 DH001_ATH1_A5-BCP2 GSE6162 Transcriptome analysis of Arabidopsis microgametogenesis
681.1 100.0 GSM142735 DH001_ATH1_A2-BCP1 GSE6162 Transcriptome analysis of Arabidopsis microgametogenesis
72.6 99.9 E-MEXP-849-raw-cel-1181980942
62.0 99.8 E-MEXP-849-raw-cel-1181980894
51.6 99.8 E-MEXP-849-raw-cel-1181980846
51.0 99.8 E-MEXP-849-raw-cel-1181980934
51.0 99.8 GSM253194 RGA-GR-DEX-REP1 GSE10019 Identification of RGA downstream genes by using steroid-inducible system
40.8 99.8 GSM253200 Nontransgenic(ga1-3rgargl2)-DEX-REP2 GSE10019 Identification of RGA downstream genes by using steroid-inducible system
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.13 7e-13 75 At5g26250 832694 sugar transporter, putative F:carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity;P:transport, transmembrane transport;C:endomembrane system, integral to membrane, membrane;BFMPOA C.G. S.X.
0.06 4e-8 59 At1g11260 837667 STP1 (SUGAR TRANSPORTER 1) Encodes a H+/hexose cotransporter. C.G. S.X.
0.04 2e-7 57 At1g34580 840362 monosaccharide transporter, putative F:carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity;P:transport, transmembrane transport;C:integral to membrane, membrane;BFMPOA C.G. S.X.
0.03 2e-6 54 At1g50310 841453 STP9 (SUGAR TRANSPORTER 9) F:carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity;P:transport, transmembrane transport;C:integral to membrane, membrane;BFMPOA C.G. S.X.
0.03 4e-5 50 At5g23270 832391 STP11 (SUGAR TRANSPORTER 11) F:carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity;P:transport, transmembrane transport;C:integral to membrane, membrane;BFMPOA C.G. S.X.
0.06 4e-5 50 At3g05960 819766 STP6 (SUGAR TRANSPORTER 6) Encodes a hexose sugar transporter that is expressed in pollen. STP6 may play a role in providing sugars during late pollen maturation or pollen tube germination. C.G. S.X.
0.02 6e-4 46 At4g21480 828233 carbohydrate transmembrane transporter/ sugar:hydrogen symporter F:carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity;P:transport, transmembrane transport;C:integral to membrane, membrane;BFMPOAV C.G. S.X.
0.07 2e-3 44 At3g19930 821531 STP4 (SUGAR TRANSPORTER 4) Encodes a sucrose hydrogen symporter that is induced by wounding. C.G. S.X.
0.05 4e-2 40 At3g19940 821532 sugar transporter, putative F:carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity;P:transport, transmembrane transport;C:integral to membrane, membrane;BFMPOA C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 8e-1 36 Glycine max PsAffx.C3000035_at PsAffx.C3000035 - - 7e-1 At1g07340 ATSTP2 (SUGAR TRANSPORTER 2) C.G. S.X.
0.03 2e-2 40 Hordeum vulgare EBro08_SQ012_P22_at EBro08_SQ012_P22 - - 1e-2 At1g07340 ATSTP2 (SUGAR TRANSPORTER 2) C.G. S.X.
0.04 3e-1 38 Oryza sativa Os01g0567500 AK069327.1 - Monosaccharide transporter 3 1e-9 At1g11260 STP1 (SUGAR TRANSPORTER 1) C.G. S.X.
0.08 3e-3 44 Populus trichocarpa Ptp.5717.1.S1_at AJ698936.1 hypothetical protein - 3e-3 At1g07340 ATSTP2 (SUGAR TRANSPORTER 2) C.G. S.X.
0.03 6e-1 36 Triticum aestivum TaAffx.48020.2.S1_x_at CA702141 - - 2e-1 At3g14600 60S ribosomal protein L18A (RPL18aC) C.G. S.X.
0.03 7e-1 34 Vitis vinifera 1620602_at BQ796987 hypothetical protein LOC100250131 - 2e-47 At5g01960 zinc finger (C3HC4-type RING finger) family protein C.G. S.X.
0.02 4e+0 32 Zea mays Zm.5701.1.S1_at BG841157 AP-4 complex subunit sigma-1 - 7e-37 At2g19790 clathrin adaptor complex small chain family protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
S GO:0009555 The process whose specific outcome is the progression of the pollen grain over time, from its formation to the mature structure. The process begins with the meiosis of the microsporocyte to form four haploid microspores. The nucleus of each microspore then divides by mitosis to form a two-celled organism, the pollen grain, that contains a tube cell as well as a smaller generative cell. The pollen grain is surrounded by an elaborate cell wall. In some species, the generative cell immediately divides again to give a pair of sperm cells. In most flowering plants, however this division takes place later, in the tube that develops when a pollen grain germinates.
S GO:0015749 The directed movement of monosaccharides into, out of, within or between cells. Monosaccharides are the simplest carbohydrates; they are polyhydric alcohols containing either an aldehyde or a keto group and between three to ten or more carbon atoms. They form the constitutional repeating units of oligo- and polysaccharides.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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