Gene omics information

Query gene ID At1g07135
Gene name glycine-rich protein
Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.2217.5At1g07135837224glycine-rich proteinF:molecular_function unknown;P:biological_process unknown;C:anchored to membrane;BMPOFVAS.X.H.G.
0.4050.8At1g69890843325-F:molecular_function unknown;P:biological_process unknown;C:unknown;PS.X.H.G.
0.4050.8At2g39650818548unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POS.X.H.G.
0.2217.5At3g57530824920CPK32 (CALCIUM-DEPENDENT PROTEIN KINASE 32)Calcium-dependent Protein Kinase. ABA signaling component that regulates the ABA-responsive gene expression via ABF4. AtCPK32 has autophosphorylation activity and can phosphorylate ABF4 in vitroS.X.H.G.
0.2014.4At4g31550829282WRKY11member of WRKY Transcription Factor; Group II-d; negative regulator of basal resistance to Pseudomonas syringae.S.X.H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
101.899.9GSM39197RRE1_Chitin3GSE2169rre1 and rre2 mutants
91.699.9GSM13784Cycloheximide - replicateGSE911Identification of LEAFY targets during reproductive transition
82.499.9GSM13783Dexamethasone plus cycloheximide - replicateGSE911Identification of LEAFY targets during reproductive transition
73.099.9GSM39198RRE1_Chitin4GSE2169rre1 and rre2 mutants
71.599.9GSM39195RRE1_Chitin1GSE2169rre1 and rre2 mutants
71.599.9GSM39212RRE2_Chitin2GSE2169rre1 and rre2 mutants
62.899.8GSM39196RRE1_Chitin2GSE2169rre1 and rre2 mutants
62.699.8GSM39211RRE2_Chitin1GSE2169rre1 and rre2 mutants
58.599.8GSM13780CycloheximideGSE911Identification of LEAFY targets during reproductive transition
58.499.8GSM13779Dexamethasone plus cycloheximideGSE911Identification of LEAFY targets during reproductive transition
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Homologous genes

Paralogous genes

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HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.044e-342At5g13910831238LEP (LEAFY PETIOLE)Encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family (LEAFY PETIOLE). The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and LEAFY PETIOLE. Acts as a positive regulator of gibberellic acid-induced germination.C.G.S.X.
0.024e-342At4g019852745601unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;MBOPFVAC.G.S.X.
0.034e-342At3g20890821638RNA binding / nucleic acid binding / nucleotide bindingF:RNA binding, nucleotide binding, nucleic acid binding;P:biological_process unknown;C:cellular_component unknown;MPBOFVAC.G.S.X.
0.021e-240At3g54220824589SCR (SCARECROW)Encodes a member of a novel family having similarity to DNA binding proteins containing basic-leucine zipper regions; scr is expressed in cortex/endodermal initial cells and in the endodermal cell lineage. Regulates the radial organization of the root. Is required cell-autonomously for distal specification of the quiescent center, which in turn regulates stem cell fate of immediately surrounding cells. SCR appears to be a direct target of SHR.C.G.S.X.
0.021e-240At3g11402820312DC1 domain-containing proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPOFBVAC.G.S.X.
0.041e-240At1g27390839629TOM20-2 (TRANSLOCASE OUTER MEMBRANE 20-2)Form of TOM20, which is a component of the TOM complex, involved in transport of nuclear-encoded mitochondrial proteinsC.G.S.X.
0.011e-240At1g08520837374CHLDF:magnesium chelatase activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding;P:chlorophyll biosynthetic process;C:magnesium chelatase complex, chloroplast;MOBFPVAC.G.S.X.
0.071e-240At1g54215841862proline-rich family proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;MPBOFVAC.G.S.X.
0.026e-238At3g06410819815nucleic acid binding / zinc ion bindingF:zinc ion binding, nucleic acid binding;P:biological_process unknown;C:unknown;OMPFBVC.G.S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.048e-238Glycine maxHgAffx.3682.1.A1_atCK349008--5e-2At1g07135glycine-rich proteinC.G.S.X.
0.041e-136Hordeum vulgareContig20626_atContig20626--4e+0At5g58240bis(5'-adenosyl)-triphosphatase, putativeC.G.S.X.
0.065e-446Oryza sativaOsAffx.14165.1.S1_at---0C.G.S.X.
0.068e-548Populus trichocarpaPtpAffx.221669.1.S1_s_atpmrna38669hypothetical protein-2e+0At3g27831-C.G.S.X.
0.064e-342Triticum aestivumTaAffx.54566.1.S1_s_atCA679969--8e-1At2g27030CAM5 (CALMODULIN 5)C.G.S.X.
0.057e-236Vitis vinifera1618771_s_atCD715283hypothetical protein LOC100262843-3e-4At1g25560TEM1 (TEMPRANILLO 1)C.G.S.X.
0.051e-136Zea maysZm.15540.1.S1_atCD219351hypothetical protein LOC100277347-1e-2At1g27390TOM20-2 (TRANSLOCASE OUTER MEMBRANE 20-2)C.G.S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

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