CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At1g07050

Gene name CONSTANS-like protein-related

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
0.50 65.3 At1g07050 837216 CONSTANS-like protein-related F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POF S.X. H.G.
0.40 50.8 At5g23240 832388 DNAJ heat shock N-terminal domain-containing protein F:unfolded protein binding, heat shock protein binding;P:protein folding;C:chloroplast;BOMPFAV S.X. H.G.
0.36 43.6 At5g42900 834301 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P S.X. H.G.
0.23 19.3 At1g17665 838343 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;OPMF S.X. H.G.
0.04 0.9 At4g16146 827304 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P S.X. H.G.
Click here to hide the above table.

Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
84.9 99.9 E-ATMX-6-raw-cel-1308219150
58.8 99.8 E-ATMX-6-raw-cel-1308219081
44.8 99.8 E-TABM-60-raw-cel-680980214
29.7 99.7 GSM134448 St.Clair_1-73_291_Mt-0_0.02%-silwet_Rep1_ATH1 GSE5758 Expression Level Polymorphism Project (ELP) - Mt-0
28.4 99.7 E-ATMX-6-raw-cel-1308219121
24.4 99.6 GSM131156 AtGen_C-6_3-C-12_REP3_ATH1 GSE5616 AtGenExpress: Response to Phytophthora infestans
24.1 99.6 GSM134400 St.Clair_1-97_296_Tsu-1_0.02%-silwet_Rep1_ATH1 GSE5755 Expression Level Polymorphism Project (ELP) - Tsu-1
23.9 99.6 GSM133066 2503 GSE5685 AtGenExpress: Pathogen Series: Pseudomonas half leaf injection
22.9 99.6 GSM142818 SS002_ATH1_A10-smith-20h GSE6174 Gene expression and carbohydrate metabolism through the diurnal cycle
22.5 99.6 GSM265858 control shortB GSE10522 Expression data of Arabidopsis thaliana rosettes during chilling
Click here to hide the above table.

Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.04 3e-7 56 At4g25990 828705 CIL chloroplast import apparatus CIA2-like. CIA2 is a transcription factor which upregulates chloroplast translocon genes C.G. S.X.
0.03 7e-5 48 At5g57180 835824 CIA2 (CHLOROPLAST IMPORT APPARATUS 2) Transcription regulator responsible for specific upregulation of the translocon genes atToc33 and atToc75 in leaves. Involved in protein import into chloroplast. C.G. S.X.
0.01 1e-3 44 At5g51630 835237 disease resistance protein (TIR-NBS-LRR class), putative F:transmembrane receptor activity, protein binding, nucleoside-triphosphatase activity, nucleotide binding, ATP binding;P:signal transduction, defense response, apoptosis, innate immune response;C:intrinsic to membrane;PMBOFA C.G. S.X.
0.02 1e-3 44 At3g28790 822511 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;MOFBPVA C.G. S.X.
0.03 1e-3 44 At1g69210 843252 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;BPO C.G. S.X.
Click here to hide the above table.

Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.13 4e-4 46 Glycine max GmaAffx.51592.1.S1_at BE820633 - - 2e-4 At1g07050 CONSTANS-like protein-related C.G. S.X.
0.04 2e+0 32 Hordeum vulgare HVSMEc0001C18f2_s_at HVSMEc0001C18f2 - - 7e-1 At2g43018 CPuORF17 (Conserved peptide upstream open reading frame 17) C.G. S.X.
0.04 6e-1 36 Oryza sativa Os05g0183400 9633.m00813 - - 2e+0 At2g22470 AGP2 (ARABINOGALACTAN PROTEIN 2) C.G. S.X.
0.09 1e-4 48 Populus trichocarpa PtpAffx.51705.1.S1_s_at CK100592 hypothetical protein - 1e-4 At1g07050 CONSTANS-like protein-related C.G. S.X.
0.06 8e-2 38 Triticum aestivum Ta.23778.2.S1_a_at BJ275521 - - 1e-3 At5g63550 - C.G. S.X.
0.10 1e-3 42 Vitis vinifera 1614061_at CB973818 hypothetical protein LOC100264676 - 2e-14 At1g25440 zinc finger (B-box type) family protein C.G. S.X.
0.03 2e+0 32 Zea mays Zm.4089.1.S1_at AY108577.1 - - 8e-2 At5g26340 MSS1 C.G. S.X.
Click here to hide the above table.

Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
N GO:0008150 Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
Click here to hide the above table.

Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
Click here to hide the above table.

Back to the CoP portal site

Back to the KAGIANA project homepage