Gene omics information

Query gene ID At1g06650
Gene name 2-oxoglutarate-dependent dioxygenase, putative
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.5673.0At1g066508371752-oxoglutarate-dependent dioxygenase, putativeencodes a protein whose sequence is similar to 2-oxoglutarate-dependent dioxygenaseS.X.H.G.
0.5368.6At5g11840831057unknown proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast;OBPS.X.H.G.
0.4761.2At4g27990828912YGGT family proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast, chloroplast envelope;BOPS.X.H.G.
0.4050.8At5g05200830402ABC1 family proteinF:protein kinase activity, ATP binding;P:protein amino acid phosphorylation;C:chloroplast, plastoglobule;OBMPFAVS.X.H.G.
0.2930.3At4g25650828670ACD1-LIKE (ACD1-LIKE)Similar to ACD1. Leaves of antisense ACD1-like plants turn yellow in darkness like wild-type whereas antisense ACD1 plants remain dark after five days of dark treatment.S.X.H.G.
0.2930.3At4g27390828847unknown proteinF:unknown;P:biological_process unknown;C:chloroplast;BPS.X.H.G.
0.2930.3At5g13720831217-F:unknown;P:unknown;C:chloroplast, chloroplast inner membrane, chloroplast envelope;BOPAS.X.H.G.
0.2830.3At3g15840820827PIFI (post-illumination chlorophyll fluorescence increase)Encodes a chloroplast-targeted protein localized in the stroma that is a novel component essential for NDH-mediated non-photochemical reduction of the plastoquinone pool in chlororespiratory electron transport.S.X.H.G.
0.2420.7At1g21640838766NADK2Encodes a protein with NAD kinase activity. The protein was also shown to bind calmodulin.S.X.H.G.
0.2319.3At5g19540832074unknown proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast;POBS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
12.099.3E-MEXP-509-raw-cel-829148385
11.099.2GSM143309Tsu_genomic_hyb_2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
10.799.2GSM143308Tsu_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
10.799.2GSM253652Ler 2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
10.599.2E-MEXP-509-raw-cel-829148772
9.799.1GSM143307Low_Na_seg_pool_tsu_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
9.699.1E-ATMX-32-raw-cel-1562974681
9.499.1GSM253650Ler 3GSE10039Low_Mo_Arabidopsis_mapping_MOT1
9.399.1E-ATMX-32-raw-cel-1562974409
9.299.1E-MEXP-509-raw-cel-829148090
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.780908At1g066408371732-oxoglutarate-dependent dioxygenase, putativeencodes a protein whose sequence is similar to a 2-oxoglutarate-dependent dioxygenaseC.G.S.X.
0.219e-21101At1g066208371712-oxoglutarate-dependent dioxygenase, putativeencodes a protein whose sequence is similar to a 2-oxoglutarate-dependent dioxygenaseC.G.S.X.
0.189e-1581At2g308408176352-oxoglutarate-dependent dioxygenase, putativeencodes a protein whose sequence is similar to 2-oxoglutarate-dependent dioxygenaseC.G.S.X.
0.161e-1377At5g595308360722-oxoglutarate-dependent dioxygenase, putativeF:transferase activity, transferring glycosyl groups;P:unknown;C:unknown;POBFMC.G.S.X.
0.128e-1271At5g434508343652-oxoglutarate-dependent dioxygenase, putativeencodes a protein whose sequence is similar to ACC oxidaseC.G.S.X.
0.148e-1271At3g614008253122-oxoglutarate-dependent dioxygenase, putative1-aminocyclopropane-1-carboxylate oxidase-like proteinC.G.S.X.
0.131e-1067At1g043808395352-oxoglutarate-dependent dioxygenase, putativeencodes a protein similar to a 2-oxoglutarate-dependent dioxygenaseC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.091e-242Glycine maxGmaAffx.64967.2.S1_atAW311203--4e-3At1g066502-oxoglutarate-dependent dioxygenase, putativeC.G.S.X.
0.039e-134Hordeum vulgareHVSMEi0012H03r2_atHVSMEi0012H03r2--2e-1At1g066402-oxoglutarate-dependent dioxygenase, putativeC.G.S.X.
0.044e-344Oryza sativaOs02g0630300AK059045.1-2OG-Fe(II) oxygenase domain containing protein4e-3At1g066502-oxoglutarate-dependent dioxygenase, putativeC.G.S.X.
0.042e-138Populus trichocarpaPtpAffx.208718.1.S1_atpmrna17288hypothetical protein-3e-2At3g614002-oxoglutarate-dependent dioxygenase, putativeC.G.S.X.
0.031e-138Triticum aestivumTa.6153.1.S1_x_atAJ615719--1e-3At1g17010oxidoreductase, 2OG-Fe(II) oxygenase family proteinC.G.S.X.
0.049e-650Vitis vinifera1607778_atCA814507hypothetical protein LOC100245189-3e-5At1g066502-oxoglutarate-dependent dioxygenase, putativeC.G.S.X.
0.033e-342Zea maysZm.11758.1.A1_atCF028197gibberellin 20 oxidase 2-1e-3At1g066402-oxoglutarate-dependent dioxygenase, putativeC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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