CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At1g06550

Gene name enoyl-CoA hydratase/isomerase family protein

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
1.00 100.0 At1g06550 837166 enoyl-CoA hydratase/isomerase family protein F:3-hydroxyisobutyryl-CoA hydrolase activity, catalytic activity;P:fatty acid beta-oxidation, metabolic process;C:cellular_component unknown;BOMFPA S.X. H.G.
0.38 46.7 At5g05270 830409 chalcone-flavanone isomerase family protein F:chalcone isomerase activity;P:flavonoid biosynthetic process;C:cellular_component unknown;P S.X. H.G.
0.28 30.3 At3g51240 824287 F3H (FLAVANONE 3-HYDROXYLASE) Encodes flavanone 3-hydroxylase that is coordinately expressed with chalcone synthase and chalcone isomerases. Regulates flavonoid biosynthesis. S.X. H.G.
0.26 24.4 At3g50620 824225 nodulation protein-related F:unknown;P:biological_process unknown;C:cellular_component unknown;PB S.X. H.G.
0.23 19.3 At2g32720 817832 CB5-B (CYTOCHROME B5 ISOFORM B) member of Cytochromes b5 S.X. H.G.
0.23 19.3 At3g48410 823999 hydrolase, alpha/beta fold family protein F:hydrolase activity;P:biological_process unknown;C:cellular_component unknown;BPOFMA S.X. H.G.
0.23 19.3 At5g24760 832545 alcohol dehydrogenase, putative F:oxidoreductase activity, binding, catalytic activity, zinc ion binding;P:oxidation reduction, metabolic process;C:chloroplast;BOPFMAV S.X. H.G.
0.22 17.5 At3g55120 824678 TT5 (TRANSPARENT TESTA 5) Catalyzes the conversion of chalcones into flavanones. Required for the accumulation of purple anthocyanins in leaves and stems. S.X. H.G.
0.20 14.4 At1g45130 841080 BGAL5 (beta-galactosidase 5) F:cation binding, beta-galactosidase activity, catalytic activity;P:lactose catabolic process, using glucoside 3-dehydrogenase, carbohydrate metabolic process, lactose catabolic process via UDP-galactose, lactose catabolic process;C:endomembrane system, beta-galactosidase complex;BPMFOA S.X. H.G.
0.17 10.2 At5g40760 834076 G6PD6 (GLUCOSE-6-PHOSPHATE DEHYDROGENASE 6) Encodes a cytosolic glucose-6-phosphate dehydrogenase that is insensitive to reduction by DTT and whose mRNA is expressed ubiquitously. S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
242.1 100.0 GSM284398 Arabidopsis GGSc2 GSE11262 Expression data from Arabidopsis Seed Compartments at the Globular Embryo Stage.
145.1 99.9 GSM284397 Arabidopsis GGSc1 GSE11262 Expression data from Arabidopsis Seed Compartments at the Globular Embryo Stage.
122.6 99.9 GSM147966 lec1-1 Globular Stage Seed 2 GSE1051 Seed development in LEAFY COTYLEDON1 mutants
121.0 99.9 GSM147965 lec1-1 Globular Stage Seed 1 GSE1051 Seed development in LEAFY COTYLEDON1 mutants
108.5 99.9 GSM147963 WT Globular Stage Seed 1 GSE680 Transcript Profiling of Arabidopsis Plant Life Cycle
106.2 99.9 GSM311284 Laser capture microdissected (LCM) general seed coat at the pre-globular stage, biological replicate 2 GSE12402 Expression data from Arabidopsis seed compartments at the pre-globular stage
104.9 99.9 GSM147964 WT Globular Stage Seed 2 GSE680 Transcript Profiling of Arabidopsis Plant Life Cycle
68.8 99.9 GSM311283 Laser capture microdissected (LCM) general seed coat at the pre-globular stage, biological replicate 1 GSE12402 Expression data from Arabidopsis seed compartments at the pre-globular stage
44.6 99.8 GSM131398 AtGen_6-7322_UV-Bstress-Roots-3.0h_Rep2 GSE5626 AtGenExpress: Stress Treatments (UV-B stress)
43.6 99.8 GSM10480 lec1-1 Cotyledon Stage Seed 2 GSE1051 Seed development in LEAFY COTYLEDON1 mutants
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.01 1e-1 38 At4g02940 828132 oxidoreductase, 2OG-Fe(II) oxygenase family protein F:oxidoreductase activity;P:biological_process unknown;C:unknown;POMFB C.G. S.X.
0.01 6e-1 36 At3g14470 820670 disease resistance protein (NBS-LRR class), putative F:protein binding, ATP binding;P:defense response, apoptosis;C:endomembrane system;PMBOFA C.G. S.X.
0.01 6e-1 36 At2g47410 819354 nucleotide binding F:nucleotide binding;P:unknown;C:CUL4 RING ubiquitin ligase complex;MFOBPAV C.G. S.X.
0.02 6e-1 36 At1g76450 843978 oxygen-evolving complex-related F:unknown;P:unknown;C:thylakoid, thylakoid lumen, chloroplast thylakoid membrane, chloroplast thylakoid lumen, chloroplast;PO C.G. S.X.
0.01 2e+0 34 At2g22340 816766 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P C.G. S.X.
0.01 2e+0 34 At1g19090 838491 RKF2 (receptor-like serine/threonine kinase 2) receptor-like serine/threonine kinase (RKF2) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.16 2e-26 121 Glycine max GmaAffx.82998.1.S1_at BE020132 - - 8e-27 At1g06550 enoyl-CoA hydratase/isomerase family protein C.G. S.X.
0.16 5e-9 61 Hordeum vulgare Contig8371_at Contig8371 - - 1e-8 At1g06550 enoyl-CoA hydratase/isomerase family protein C.G. S.X.
0.09 5e-6 54 Oryza sativa Os01g0752200 AK069590.1 - Enoyl-CoA hydratase/isomerase domain containingprotein 5e-6 At1g06550 enoyl-CoA hydratase/isomerase family protein C.G. S.X.
0.19 3e-40 167 Populus trichocarpa PtpAffx.106733.1.A1_at CV265850 hypothetical protein - 3e-40 At1g06550 enoyl-CoA hydratase/isomerase family protein C.G. S.X.
0.13 4e-8 59 Triticum aestivum Ta.9246.1.S1_at CD454548 - - 5e-8 At1g06550 enoyl-CoA hydratase/isomerase family protein C.G. S.X.
0.06 1e-5 50 Vitis vinifera 1610008_s_at CF404420 hypothetical protein LOC100266026 - 2e-5 At1g06550 enoyl-CoA hydratase/isomerase family protein C.G. S.X.
0.17 4e-6 52 Zea mays Zm.17229.1.A1_at CF637668 3-hydroxyisobutyryl-CoA hydrolase/ catalytic - 1e-5 At1g06550 enoyl-CoA hydratase/isomerase family protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
C GO:0006635 A fatty acid oxidation process that results in the complete oxidation of a long-chain fatty acid. Fatty acid beta-oxidation begins with the addition of coenzyme A to a fatty acid, and occurs by successive cycles of reactions during each of which the fatty acid is shortened by a two-carbon fragment removed as acetyl coenzyme A; the cycle continues until only two or three carbons remain (as acetyl-CoA or propionyl-CoA respectively).
L GO:0008152 The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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