Gene omics information

Query gene ID At1g05800
Gene name DGL (DONGLE)
Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At1g05800837089DGL (DONGLE)Encodes a galactolipase. Located in the chloroplast. Involved in the initial step of jasmonic acid biosynthesis. Expressed in vegetative tissues and is necessary for the biosynthesis of basal-level JAs in vegetative tissues.S.X.H.G.
0.4050.8At2g21920816728-F:unknown;P:biological_process unknown;C:unknown;PS.X.H.G.
0.4050.8At4g15060827169F-box protein-relatedF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMBFS.X.H.G.
0.2522.6At2g34280817989S locus F-box-related / SLF-relatedF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POS.X.H.G.
0.2115.8At4g11490826754protein kinase family proteinF:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVAS.X.H.G.
0.157.8At1g14520838014MIOX1 (MYO-INISITOL OXYGENASE)Encodes MIOX1. Belongs to myo-inositol oxygenase gene family.S.X.H.G.
0.092.8At2g188203768266transposable element geneF:unknown;P:unknown;C:unknownS.X.H.G.
0.092.8At1g53360841772F-box family protein-relatedF:molecular_function unknown;P:biological_process unknown;C:unknown;PS.X.H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
1463.4100.0GSM184556Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis root
444.3100.0GSM184551Whole roots 2hr KCl control treated then incubated in protoplast-generating solution minus enzymes, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis root
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.535e-45182At2g31690817725lipase class 3 family proteinencodes a triacylglycerol lipase located in plastoglobuli and involved in the degradation of triacylglycerol. It also has impact on leaf senescence and maintaining the structural integrity of thylakoids.C.G.S.X.
0.027e-136At1g15380838107lactoylglutathione lyase family protein / glyoxalase I family proteinF:lactoylglutathione lyase activity;P:carbohydrate metabolic process;C:cellular_component unknown;BPOMFAC.G.S.X.
0.013e+034At5g65510836677AIL7 (AINTEGUMENTA-like 7)F:transcription factor activity, DNA binding;P:organ morphogenesis, regulation of transcription, DNA-dependent;C:nucleus;POBC.G.S.X.
0.013e+034At5g61190836240zinc finger protein-relatedF:zinc ion binding, nucleic acid binding;P:unknown;C:chloroplast;MOPFBAVC.G.S.X.
0.013e+034At5g04560830335DME (DEMETER)Encodes a DNA glycosylase DEMETER (DME). Responsible for endosperm maternal-allele-specific hypomethylation at the MEDEA (MEA) gene. DME can excise 5-methylcytosine in vitro and when expressed in E. coli. DME establishes MEA imprinting by removing 5-methylcytosine to activate the maternal allele.C.G.S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.024e+034Glycine maxGmaAffx.54236.1.S1_atBE475543--2e-11At1g20030pathogenesis-related thaumatin family proteinC.G.S.X.
0.025e+032Hordeum vulgareEBro02_SQ004_C14_atEBro02_SQ004_C14--2e+0At5g66930unknown proteinC.G.S.X.
0.036e-344Oryza sativaOsAffx.18942.1.S1_at---0C.G.S.X.
0.064e-654Populus trichocarpaPtpAffx.211856.1.S1_atpmrna23271hypothetical protein-6e-7At2g31690lipase class 3 family proteinC.G.S.X.
0.027e-136Triticum aestivumTaAffx.29315.1.S1_atCA645750--1e+1At5g03440unknown proteinC.G.S.X.
0.028e-134Vitis vinifera1612097_atCB348571--6e-5At4g23400PIP1C.G.S.X.
0.025e+032Zea maysZmAffx.138.1.A1_atAI667759--3e+0At1g66510AAR2 protein familyC.G.S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
XGO:0009611A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to the organism.
XGO:0009695The chemical reactions and pathways resulting in the formation of jasmonic acid, a fatty acid derivative.
XGO:0030308Any process that stops, prevents or reduces the frequency, rate or extent of cell growth.
XGO:0050832Reactions triggered in response to the presence of a fungus that act to protect the cell or organism.
CGO:0006629The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

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