Gene omics information

Query gene ID At1g05570
Gene name CALS1 (CALLOSE SYNTHASE 1)
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.5570.6At1g05570837059CALS1 (CALLOSE SYNTHASE 1)Encodes a callose synthase 1 catalytic subunit . Member of Glycosyltransferase Family- 48.S.X.H.G.
0.3338.1At5g35200833474epsin N-terminal homology (ENTH) domain-containing proteinF:phospholipid binding, clathrin binding, binding, phosphatidylinositol binding;P:clathrin coat assembly;C:plasma membrane;MPFOBS.X.H.G.
0.2930.3At3g19190821453-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MFOPBS.X.H.G.
0.146.8At1g26440839185ATUPS5 (ARABIDOPSIS THALIANA UREIDE PERMEASE 5)uptake assays in a yeast mutant indicated this splice variant is not a cellular importer for allantoin, uracil or xanthineS.X.H.G.
0.030.6At5g12200831093dihydropyrimidinase / DHPase / dihydropyrimidine amidohydrolase / hydantoinase (PYD2)F:hydrolase activity, hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, dihydropyrimidinase activity;P:unknown;C:endomembrane system;OBMAFPS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
39.199.8GSM265413Arabidopsis, whole roots, -Fe, replicate 3GSE10496Expression analysis of the effect of protoplasting and FACS sorting in roots exposed to iron deficiency (-Fe)
37.999.8GSM142625MC002_ATH1_A1.3-dubos-wtxGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
35.199.7GSM142629MC002_ATH1_A3.1-dubos-6kxGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
34.199.7GSM142624MC002_ATH1_A1.2-dubos-wtxGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
31.899.7GSM265433Arabidopsis, root, longitudinal zone 4, -Fe conditions, rep 2GSE10497Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
31.599.7GSM142632MC002_ATH1_A4.1-dubos-6kcGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
30.799.7GSM142623MC002_ATH1_A1.1-dubos-wtxGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
30.399.7GSM142631MC002_ATH1_A3.3-dubos-6kxGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
29.899.7GSM142641MC002_ATH1_A7.1-dubos-wLhGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
29.799.7GSM142630MC002_ATH1_A3.2-dubos-6kxGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.8703590At2g31960817755ATGSL03 (GLUCAN SYNTHASE-LIKE 3)encodes a protein similar to callose synthaseC.G.S.X.
0.570839At5g36870833654ATGSL09 (glucan synthase-like 9)encodes a gene similar to callose synthaseC.G.S.X.
0.381e-79299At5g13000831140ATGSL12 (glucan synthase-like 12)encodes a gene similar to callose synthaseC.G.S.X.
0.064e-67258At1g050852745742unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PC.G.S.X.
0.031e-1173At3g07160819903ATGSL10 (glucan synthase-like 10)Encodes GSL10, a member of the Glucan Synthase-Like (GSL) family believed to be involved in the synthesis of the cell wall component callose. GSL10 is required for male gametophyte development and plant growth. Has a role in entry of microspores into mitosis. GSL10 mutation leads to perturbation of microspore division symmetry, irregular callose deposition and failure of generative cell engulfment by the vegetative cell cytoplasm. Also refer to GSL8 (At2g36850).C.G.S.X.
0.061e-1173At3g14570820683ATGSL04 (glucan synthase-like 4)encodes a protein similar to callose synthaseC.G.S.X.
0.051e-1173At2g36850818258GSL8 (GLUCAN SYNTHASE-LIKE 8)Encodes GSL8, a member of the Glucan Synthase-Like (GSL) family believed to be involved in the synthesis of the cell wall component callose. GSL8 is required for male gametophyte development and plant growth. Has a role in entry of microspores into mitosis. Also refer to GSL10 (At3g07160).C.G.S.X.
0.095e-1171At2g13680815852CALS5 (CALLOSE SYNTHASE 5)Responsible for the synthesis of callose deposited at the primary cell wall of meiocytes, tetrads and microspores. Required for exine formation during microgametogenesis and for pollen viability. Highest expression in meiocytes, tetrads, microspores and mature pollen.C.G.S.X.
0.078e-1067At3g59100825079ATGSL11 (glucan synthase-like 11)encodes a protein similar to callose synthaseC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.098e-1791Glycine maxGma.4001.1.S1_atBI424053--4e-11At1g05570CALS1 (CALLOSE SYNTHASE 1)C.G.S.X.
0.168e-33143Hordeum vulgareContig4949_atContig4949--3e-53At5g13000ATGSL12 (glucan synthase-like 12)C.G.S.X.
0.281e-56224Oryza sativaOs06g07288009634.m04991-Callose synthase 1 catalytic subunit4e-54At5g13000ATGSL12 (glucan synthase-like 12)C.G.S.X.
0.244e-65252Populus trichocarpaPtpAffx.3087.1.A1_s_atCV256705hypothetical protein-8e-66At1g05570CALS1 (CALLOSE SYNTHASE 1)C.G.S.X.
0.079e-1067Triticum aestivumTaAffx.37149.1.A1_atBJ298442--1e-46At5g13000ATGSL12 (glucan synthase-like 12)C.G.S.X.
0.052e-1791Vitis vinifera1615939_atBQ799440hypothetical protein LOC100256340-7e-18At1g05570CALS1 (CALLOSE SYNTHASE 1)C.G.S.X.
0.203e-35151Zea maysZm.13598.1.A1_atAY107727.1--2e-27At5g13000ATGSL12 (glucan synthase-like 12)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
CGO:0006075The chemical reactions and pathways resulting in the formation of beta-1,3 glucans, compounds composed of glucose residues linked by 1,3-beta-D-glucosidic bonds.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name
00359Link to KaPPA-View 4Glucosyltransferase



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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