Gene omics information

Query gene ID At1g05510
Gene name -
Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.4457.2At1g05510837053-Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds.S.X.H.G.
1.00100.0At1g54860841925unknown proteinF:molecular_function unknown;P:biological_process unknown;C:anchored to membrane;PS.X.H.G.
0.9195.6At1g17810838359BETA-TIP (BETA-TONOPLAST INTRINSIC PROTEIN)beta-tonoplast intrinsic protein (beta-TIP) mRNA, completeS.X.H.G.
0.8089.8At5g07190830610ATS3 (ARABIDOPSIS THALIANA SEED GENE 3)Gene is expressed preferentially in the embryo and encodes a unique protein of unknown function.S.X.H.G.
0.7788.0At1g03890839379cupin family proteinF:nutrient reservoir activity;P:biological_process unknown;C:endomembrane system;PBMOS.X.H.G.
0.6176.7At4g26740828781ATS1 (ARABIDOPSIS THALIANA SEED GENE 1)Gene is expressed preferentially in the embryo, has similarity to a rice ABA-responsive gene, EFA27.S.X.H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
394.7100.0GSM10454WT Post-Mature Green Seed 1GSE680Transcript Profiling of Arabidopsis Plant Life Cycle
375.6100.0GSM10456WT Post-Mature Green Seed 2GSE680Transcript Profiling of Arabidopsis Plant Life Cycle
343.4100.0GSM131708ATGE_84_DGSE5634AtGenExpress: Developmental series (siliques and seeds)
331.2100.0GSM131704ATGE_83_BGSE5634AtGenExpress: Developmental series (siliques and seeds)
317.8100.0GSM131706ATGE_84_AGSE5634AtGenExpress: Developmental series (siliques and seeds)
313.5100.0GSM131707ATGE_84_BGSE5634AtGenExpress: Developmental series (siliques and seeds)
304.8100.0GSM131703ATGE_83_AGSE5634AtGenExpress: Developmental series (siliques and seeds)
286.6100.0GSM131705ATGE_83_CGSE5634AtGenExpress: Developmental series (siliques and seeds)
286.4100.0GSM131701ATGE_82_BGSE5634AtGenExpress: Developmental series (siliques and seeds)
251.3100.0GSM131700ATGE_82_AGSE5634AtGenExpress: Developmental series (siliques and seeds)
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Homologous genes

Paralogous genes

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HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.662e-120432At2g31985817759unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;BPFC.G.S.X.
0.029e-238At1g20930838687CDKB2Cyclin-dependent kinase, expressed in flowers and suspension cell culture, expression peaks during M phase in synchronized cultures. Required for proper organization of the shoot apical meristem and for hormone signaling. Expressed in the shoot apical meristem. Involved in regulation of the G2/M transition of the mitotic cell cycle.C.G.S.X.
0.014e-136At1g09910837523lyaseF:lyase activity;P:carbohydrate metabolic process;C:cellular_component unknown;PFBC.G.S.X.
0.021e+034At2g25940817135ALPHA-VPE (alpha-vacuolar processing enzyme)Encodes a vacuolar processing enzyme belonging to a novel group of cysteine proteinases that is expressed in vegetative organs and is upregulated in association with various types of cell death and under stressed conditions.C.G.S.X.
0.026e+032At5g59840836105Ras-related GTP-binding family proteinF:GTP binding;P:protein transport, small GTPase mediated signal transduction;C:plasma membrane;MOFPBVAC.G.S.X.
0.016e+032At5g63960836517EMB2780 (EMBRYO DEFECTIVE 2780)F:DNA-directed DNA polymerase activity, DNA binding, nucleotide binding, nucleic acid binding;P:nucleobase, nucleoside, nucleotide and nucleic acid metabolic process, DNA replication;C:nucleus;OVBMFAPC.G.S.X.
0.026e+032At5g42040834209RPN12b (Regulatory Particle Non-ATPase 12b)F:peptidase activity;P:proteolysis;C:proteasome regulatory particle;MFOPC.G.S.X.
0.026e+032At5g03520831817ATRAB8CF:GTP binding;P:protein transport, small GTPase mediated signal transduction;C:unknown;MOFPBVAC.G.S.X.
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Orthologous genes

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HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.184e-23109Glycine maxGma.2875.1.S1_atAW318090--4e-23At1g05510-C.G.S.X.
0.031e+130Hordeum vulgareHV12F07u_atHV12F07u--2e-1At3g17160unknown proteinC.G.S.X.
0.128e-1065Oryza sativaOs05g0569500AF049892.1--6e-10At1g05510-C.G.S.X.
0.033e-240Populus trichocarpaPtpAffx.137248.1.S1_atBU874141hypothetical protein-5e-16At3g21580cobalt ion transmembrane transporterC.G.S.X.
0.049e-238Triticum aestivumTa.14510.1.S1_atCD910502--1e-7At2g31985unknown proteinC.G.S.X.
0.063e-857Vitis vinifera1621232_atBQ793032hypothetical protein LOC100249843-1e-7At1g05510-C.G.S.X.
0.036e-134Zea maysZm.10867.1.A1_atBM073190--8e-2At2g20350AP2 domain-containing transcription factor, putativeC.G.S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
XGO:0009737A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an abscisic acid stimulus.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

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