CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At1g04700

Gene name protein kinase family protein

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
0.88 94.0 At1g04700 839437 protein kinase family protein F:protein serine/threonine/tyrosine kinase activity, protein kinase activity;P:protein amino acid phosphorylation;C:cytosol;MPOBFVA S.X. H.G.
0.93 96.4 At1g68110 843139 epsin N-terminal homology (ENTH) domain-containing protein / clathrin assembly protein-related F:phospholipid binding, clathrin binding, binding, phosphatidylinositol binding;P:clathrin coat assembly;C:clathrin coat;PMFO S.X. H.G.
0.85 92.4 At2g26450 817185 pectinesterase family protein F:enzyme inhibitor activity, pectinesterase activity;P:cell wall modification;C:cell wall, plant-type cell wall;PBFMO S.X. H.G.
0.84 91.9 At3g20580 821605 COBL10 (COBRA-LIKE PROTEIN 10 PRECURSOR) F:unknown;P:biological_process unknown;C:anchored to membrane;P S.X. H.G.
0.82 90.9 At3g09530 820110 ATEXO70H3 (exocyst subunit EXO70 family protein H3) A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree. S.X. H.G.
0.81 90.4 At3g05610 819727 pectinesterase family protein F:enzyme inhibitor activity, pectinesterase activity;P:cell wall modification;C:cell wall, plant-type cell wall;OBPFMVA S.X. H.G.
0.80 89.8 At2g18470 816362 protein kinase family protein F:protein serine/threonine kinase activity, protein kinase activity, ATP binding;P:protein amino acid phosphorylation;C:chloroplast;MOPBFVA S.X. H.G.
0.80 89.8 At3g17980 821323 C2 domain-containing protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPFO S.X. H.G.
0.80 89.8 At2g31500 817708 CPK24 member of Calcium Dependent Protein Kinase S.X. H.G.
0.79 89.1 At5g50830 835155 unknown protein F:molecular_function unknown;P:N-terminal protein myristoylation;C:cellular_component unknown;OMFBPVA S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
172.3 100.0 E-ATMX-35-raw-cel-1574334880
154.7 99.9 GSM142740 DH001_ATH1_A7-MPG1 GSE6162 Transcriptome analysis of Arabidopsis microgametogenesis
130.2 99.9 GSM131637 ATGE_73_B GSE5632 AtGenExpress: Developmental series (flowers and pollen)
120.4 99.9 E-MEXP-1138-raw-cel-1432772746
116.4 99.9 GSM239253 CaMV::DME pollen GSE9408 Identification of putative Arabidopsis DEMETER target genes by GeneChip Analysis
110.0 99.9 E-MEXP-1138-raw-cel-1432772874
105.8 99.9 GSM131638 ATGE_73_C GSE5632 AtGenExpress: Developmental series (flowers and pollen)
102.8 99.9 E-MEXP-1138-raw-cel-1432773226
100.6 99.9 E-ATMX-35-raw-cel-1574334864
100.4 99.9 E-MEXP-1138-raw-cel-1432772650
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.10 2e-27 125 At3g24715 822069 ATP binding / protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase F:protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, ATP binding;P:protein amino acid phosphorylation;C:unknown;MPOBFVA C.G. S.X.
0.12 5e-19 97 At1g16270 838196 protein kinase family protein F:protein serine/threonine/tyrosine kinase activity, protein kinase activity;P:protein amino acid phosphorylation;C:cytosol, nucleus;MPOBFVA C.G. S.X.
0.04 3e-17 91 At1g79570 844295 protein kinase family protein F:protein serine/threonine/tyrosine kinase activity, protein kinase activity;P:protein amino acid phosphorylation;C:cytosol;MPOBFVA C.G. S.X.
0.06 2e-6 56 At3g46920 823845 protein kinase family protein F:protein serine/threonine/tyrosine kinase activity, protein kinase activity;P:protein amino acid phosphorylation;C:chloroplast;MPOBFVA C.G. S.X.
0.06 3e-5 52 At2g35050 818070 protein kinase family protein F:protein serine/threonine/tyrosine kinase activity, protein kinase activity;P:protein amino acid phosphorylation;C:cellular_component unknown;MPOBFVA C.G. S.X.
0.01 1e-1 40 At3g53380 824506 lectin protein kinase family protein F:carbohydrate binding, kinase activity;P:protein amino acid phosphorylation;C:plasma membrane;MPOBFVA C.G. S.X.
0.01 1e-1 40 At1g53440 841779 leucine-rich repeat family protein / protein kinase family protein F:kinase activity;P:protein amino acid phosphorylation;C:plasma membrane;PMOBFVA C.G. S.X.
0.01 2e+0 36 At5g59550 836074 zinc finger (C3HC4-type RING finger) family protein F:protein binding, zinc ion binding;P:response to chitin;C:unknown;PMOFVB C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.09 4e-8 61 Glycine max Gma.17790.1.S1_at BF425730 - - 1e-94 At1g79570 protein kinase family protein C.G. S.X.
0.12 8e-7 56 Hordeum vulgare Contig6929_at Contig6929 - - 3e-19 At3g46920 protein kinase family protein C.G. S.X.
0.09 5e-5 52 Oryza sativa OsAffx.28586.1.S1_at - - - 0 C.G. S.X.
0.23 6e-41 171 Populus trichocarpa PtpAffx.200205.1.S1_at pmrna388 hypothetical protein - 6e-34 At1g04700 protein kinase family protein C.G. S.X.
0.11 1e-10 69 Triticum aestivum Ta.6493.1.S1_s_at BJ217296 - - 1e-18 At3g46920 protein kinase family protein C.G. S.X.
0.09 4e-29 129 Vitis vinifera 1611685_at CF207065 hypothetical protein LOC100242423 - 1e-87 At1g79570 protein kinase family protein C.G. S.X.
0.09 2e-7 57 Zea mays Zm.12879.1.S1_at AY105591.1 salt-inducible protein kinase - 5e-26 At2g35050 protein kinase family protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
C GO:0006468 The process of introducing a phosphate group on to a protein.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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