CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At1g04430

Gene name dehydration-responsive protein-related

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
1.00 100.0 At1g04430 839522 dehydration-responsive protein-related F:unknown;P:biological_process unknown;C:Golgi apparatus, plasma membrane;PBO S.X. H.G.
0.45 58.3 At3g49720 824134 unknown protein F:molecular_function unknown;P:biological_process unknown;C:chloroplast thylakoid membrane, Golgi apparatus, plasma membrane, membrane;P S.X. H.G.
0.45 58.3 At3g05910 819760 pectinacetylesterase, putative F:carboxylesterase activity;P:biological_process unknown;C:endomembrane system;PMOB S.X. H.G.
0.44 57.2 At4g14360 827079 dehydration-responsive protein-related F:unknown;P:N-terminal protein myristoylation;C:Golgi apparatus;PBO S.X. H.G.
0.42 53.9 At3g25140 822105 QUA1 (QUASIMODO 1) Quasimodo1, encodes a glycosyltransferase, involved in homogalacturonan biosynthesis; mutant shows cell adhesion defect and lower wall uronic acid content. S.X. H.G.
0.41 52.4 At1g76670 844000 transporter-related F:unknown;P:response to nematode;C:membrane;PMFOB S.X. H.G.
0.41 52.4 At1g75680 843902 AtGH9B7 (Arabidopsis thaliana glycosyl hydrolase 9B7) F:hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:plasma membrane;PBMOF S.X. H.G.
0.41 52.4 At2g41770 818776 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMPBA S.X. H.G.
0.37 45.0 At5g50420 835110 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPO S.X. H.G.
0.36 43.6 At3g23660 821946 transport protein, putative F:protein binding, transporter activity, zinc ion binding;P:intracellular protein transport, transport, ER to Golgi vesicle-mediated transport;C:COPII vesicle coat;MFOP S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
33.3 99.7 GSM184477 Lateral Root Cap root cells 2hr KCl control treated, biological rep2 GSE7631 Cell-specific nitrogen responses in the Arabidopsis root
26.1 99.7 GSM252690 Section of Root from 270 mm to 340 mm harvested immediately rep1 GSE9996 Organ regeneration in plants is independent of stem cell niche activity
25.3 99.6 GSM184523 Stele root cells 2hr KCl control treated, biological rep2 GSE7631 Cell-specific nitrogen responses in the Arabidopsis root
20.3 99.6 GSM184522 Stele root cells 2hr KCl control treated, biological rep1 GSE7631 Cell-specific nitrogen responses in the Arabidopsis root
19.5 99.6 GSM184483 Lateral Root Cap root cells 2hr continuous KNO3 treated, biological rep2 GSE7631 Cell-specific nitrogen responses in the Arabidopsis root
18.7 99.5 GSM252692 Section of Root from 270 mm to 340 mm harvested immediately rep3 GSE9996 Organ regeneration in plants is independent of stem cell niche activity
18.7 99.5 GSM184481 Lateral Root Cap root cells 2hr transitory KNO3 treated, biological rep3 GSE7631 Cell-specific nitrogen responses in the Arabidopsis root
17.0 99.5 GSM133979 Birnbaum_1-9_StageII-2_Rep2_ATH1 GSE5749 A gene expression map of the Arabidopsis root
16.8 99.5 GSM184525 Stele root cells 2hr transitory KNO3 treated, biological rep1 GSE7631 Cell-specific nitrogen responses in the Arabidopsis root
15.9 99.5 GSM133978 Birnbaum_1-8_StageII-1_Rep1_ATH1 GSE5749 A gene expression map of the Arabidopsis root
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.57 8e-131 468 At4g14360 827079 dehydration-responsive protein-related F:unknown;P:N-terminal protein myristoylation;C:Golgi apparatus;PBO C.G. S.X.
0.51 2e-94 347 At3g23300 821910 dehydration-responsive protein-related F:unknown;P:biological_process unknown;C:Golgi apparatus, plasma membrane, nucleus;PBO C.G. S.X.
0.17 4e-15 83 At5g14430 831294 dehydration-responsive protein-related F:unknown;P:unknown;C:Golgi apparatus, plasma membrane, plant-type cell wall;PBO C.G. S.X.
0.06 1e-12 75 At5g04060 830285 dehydration-responsive protein-related F:unknown;P:biological_process unknown;C:Golgi apparatus;PBOFM C.G. S.X.
0.02 2e-7 57 At1g26850 839229 dehydration-responsive family protein F:unknown;P:unknown;C:Golgi apparatus, membrane;PBO C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.34 4e-44 180 Glycine max Gma.16291.1.S1_at AW350377 - - 9e-128 At3g23300 dehydration-responsive protein-related C.G. S.X.
0.27 3e-30 133 Hordeum vulgare Contig8375_at Contig8375 - - 1e-37 At3g23300 dehydration-responsive protein-related C.G. S.X.
0.23 5e-38 161 Oryza sativa Os10g0477100 AK067258.1 - Ankyrin-like protein 5e-43 At4g14360 dehydration-responsive protein-related C.G. S.X.
0.32 1e-59 232 Populus trichocarpa PtpAffx.201656.1.S1_at pmrna3294 hypothetical protein - 1e-120 At3g23300 dehydration-responsive protein-related C.G. S.X.
0.19 4e-31 137 Triticum aestivum Ta.5250.1.S1_s_at CK198169 - - 2e-46 At4g14360 dehydration-responsive protein-related C.G. S.X.
0.30 4e-22 105 Vitis vinifera 1612406_at CB920857 hypothetical protein LOC100263157 - 7e-22 At1g04430 dehydration-responsive protein-related C.G. S.X.
0.01 2e+0 34 Zea mays Zm.4151.1.A1_at CK145163 hypothetical protein LOC100276753 - 5e-4 At4g31410 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
N GO:0008150 Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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